LOCUS       AJF01585.1              1400 aa    PRT              BCT 20-JUN-2017
DEFINITION  Mycobacterium tuberculosis H37RvSiena putative arabinofuranosyltrans
            ferase AftD protein.
ACCESSION   CP007027-241
PROTEIN_ID  AJF01585.1
SOURCE      Mycobacterium tuberculosis H37RvSiena
  ORGANISM  Mycobacterium tuberculosis H37RvSiena
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1  (bases 1 to 4410911)
  AUTHORS   Santoro,F., Guerrini,V., Lazzeri,E., Iannelli,F. and Pozzi,G.
  TITLE     Genomic polymorphisms in a Laboratory Isolate of Mycobacterium
            tuberculosis Reference Strain H37Rv (ATCC27294)
  JOURNAL   New Microbiol. 40 (1), 62-69 (2017)
   PUBMED   27819398
REFERENCE   2  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2013) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
REFERENCE   3  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2015) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
  REMARK    Protein update by submitter
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            Annotation modified by submitter.
            
            ##Assembly-Data-START##
            Assembly Method       :: Ray v. 2.3.1
            Coverage              :: 300
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 12/30/2013 09:28:23
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 422554)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,146
            CDS                          :: 4,050
            Pseudo Genes                 :: 42
            CRISPR Arrays                :: 2
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNA                        :: 6
            Frameshifted Genes           :: 34
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis H37RvSiena"
                     /mol_type="genomic DNA"
                     /strain="H37RvSiena"
                     /db_xref="taxon:1437856"
     protein         /gene="aftD"
                     /locus_tag="Y980_0236c"
                     /experiment="EXISTENCE: identified in proteomics study"
                     /note="Rv0236c, (MTV034.01c, MTV034.02c,
                     MTCY08D5.32c),len: 1400 aa. Possible aftD,
                     arabinofuranosyltransferase (See Skovierova et al., 2009).
                     Predicted to be in the GT-C superfamily of
                     glycosyltransferases (See Liu and Mushegian,2003).
                     Probable conserved transmembrane protein, equivalent to
                     AL022486|CAC32102.1|MLCB1883_7 possible integral membrane
                     protein from Mycobacterium leprae (1440 aa). A core
                     mycobacterial gene; conserved in mycobacterial strains
                     (See Marmiesse et al., 2004)."
                     /transl_table=11
                     /db_xref="GOA:P96419"
                     /db_xref="InterPro:IPR000421"
                     /db_xref="InterPro:IPR008979"
                     /db_xref="InterPro:IPR021798"
                     /db_xref="UniProtKB/Swiss-Prot:P96419"
BEGIN
        1 MAPLSRKWLP VVGAVALALT FAQSPGQVSP DTKLDLTANP LRFLARATNL WNSDLPFGQA
       61 QNQAYGYLFP HGTFFVIGHL LGVPGWVTQR LWWAVLLTVG FWGLLRVAEA LGVGGPSSRV
      121 VGAVAFALSP RVLTTLGSIS SETLPMMLAP WVLLPTILAL RGTSGRSVRA LAAQAGLAVA
      181 LMGAVNAIAT LAGCLPAVIW WACHRPNRLW WRYTAWWLLA MALATLWWVM ALTQLHGVSP
      241 PFLDFIESSG VTTQWSSLVE VLRGTDSWTP FVAPNATAGA PLVTGSAAIL GTCLVAAAGL
      301 AGLTSPAMPA RGRLVTMLLV GVVLLAVGHR GGLASPVAHP VQAFLDAAGT PLRNVHKVGP
      361 VIRLPLVLGL AQLLSRVPLP GSAPRPAWLR AFAHPERDKR VAVAVVALTA LMVSTSLAWT
      421 GRVAPPGTFG ALPQYWQEAA DWLRTHHAAT PTPGRVLVVP GAPFATQVWG TSHDEPLQVL
      481 GDGPWGVRDS IPLTPPQTIR ALDSVQRLFA AGRPSAGLAD TLARQGISYV LVRNDLDPET
      541 SRSARPILLH RSIAGSPGLA KLAEFGAPVG PDPLAGFVND SGLRPRYPAI EIYRVSAPAN
      601 PGAPYFAATD QLARVDGGPE VLLRLDERRR LQGQPPLGPV LMTADARAAG LPVPQVAVTD
      661 TPVARETDYG RVDHHSSAIR APGDARHTYN RVPDYPVPGA EPVVGGWTGG RITVSSSSAD
      721 ATAMPDVAPA SAPAAAVDGD PATAWVSNAL QAAVGQWLQV DFDRPVTNAV VTLTPSATAV
      781 GAQVRRILIE TVNGSTTLRF DEAGKPLTAA LPYGETPWVR FTAAATDDGS AGVQFGITDL
      841 AITQYDASGF AHPVQLRHTV LVPGPPPGSA IAGWDLGSEL LGRPGCAPGP DGVRCAASMA
      901 LAPEEPANLS RTLTVPRPVS VTPMVWVRPR QGPKLADLIA APSTTRASGD SDLVDILGSA
      961 YAAADGDPAT AWTAPQRVVQ HKTPPTLTLT LPRPTVVTGL RLAASRSMLP AHPTVVAINL
     1021 GDGPQVRQLQ VGELTTLWLH PRVTDTVSVS LLDWDDVIDR NALGFDQLKP PGLAEVVVLS
     1081 AGGAPIAPAD AARNRARALT VDCDHGPVVA VAGRFVHTSI RTTVGALLDG EPVAALPCER
     1141 EPIALPAGQQ ELLISPGAAF VVDGAQLSTP GAGLSSATVT SAETGAWGPT HREVRVPESA
     1201 TSRVLVVPES INSGWVARTS TGARLTPIAV NGWQQAWVVP AGNPGTITLT FAPNSLYRAS
     1261 LAIGLALLPL LALLAFWRTG RRQLADRPTP PWRPGAWAAA GVLAAGAVIA SIAGVMVMGT
     1321 ALGVRYALRR RERLRDRVTV GLAAGGLILA GAALSRHPWR SVDGYAGNWA SVQLLALISV
     1381 SVVAASVVAT SESRGQDRMQ
//