LOCUS       AJF01519.1               530 aa    PRT              BCT 20-JUN-2017
DEFINITION  Mycobacterium tuberculosis H37RvSiena Mce-family protein
            Mce1D protein.
ACCESSION   CP007027-175
PROTEIN_ID  AJF01519.1
SOURCE      Mycobacterium tuberculosis H37RvSiena
  ORGANISM  Mycobacterium tuberculosis H37RvSiena
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1  (bases 1 to 4410911)
  AUTHORS   Santoro,F., Guerrini,V., Lazzeri,E., Iannelli,F. and Pozzi,G.
  TITLE     Genomic polymorphisms in a Laboratory Isolate of Mycobacterium
            tuberculosis Reference Strain H37Rv (ATCC27294)
  JOURNAL   New Microbiol. 40 (1), 62-69 (2017)
   PUBMED   27819398
REFERENCE   2  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2013) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
REFERENCE   3  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2015) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
  REMARK    Protein update by submitter
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            Annotation modified by submitter.
            
            ##Assembly-Data-START##
            Assembly Method       :: Ray v. 2.3.1
            Coverage              :: 300
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 12/30/2013 09:28:23
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 422554)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,146
            CDS                          :: 4,050
            Pseudo Genes                 :: 42
            CRISPR Arrays                :: 2
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNA                        :: 6
            Frameshifted Genes           :: 34
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis H37RvSiena"
                     /mol_type="genomic DNA"
                     /strain="H37RvSiena"
                     /db_xref="taxon:1437856"
     protein         /gene="mce1D"
                     /locus_tag="Y980_0172"
                     /experiment="EXISTENCE: identified in proteomics study"
                     /note="Rv0172, (MTCI28.12) Mce1D; belongs to 24-membered
                     Mycobacterium tuberculosis Mce protein family (see
                     citations below), highly similar to Mycobacterium
                     tuberculosis proteins O07786|Rv0592|MTCY19H5.30c|mce2D
                     (508 aa); O53970|Rv1969|MTV051.07|mce3D (423 aa); etc.
                     Also highly similar to others e.g. NP_302659.1|NC_002677
                     putative secreted protein from Mycobacterium leprae (531
                     aa); CAC12795.1|AL445327 putative secreted protein from
                     Streptomyces coelicolor (337 aa); etc. Hydrophobic region
                     at N-terminus. Predicted to be an outer membrane protein
                     (See Song et al., 2008)."
                     /transl_table=11
                     /db_xref="InterPro:IPR003399"
                     /db_xref="InterPro:IPR005693"
                     /db_xref="UniProtKB/TrEMBL:L7N5G3"
BEGIN
        1 MSTIFDIRNL RLPQLSRASV VIGSLVVVLA LAAGIVGVRL YQKLTNNTVV AYFTQANALY
       61 VGDKVQIMGL PVGSIDKIEP AGDKMKVTFH YQNKYKVPAN ASAVILNPTL VASRNIQLEP
      121 PYRGGPVLAD NAVIPVERTQ VPTEWDELRD SVSHIIDELG PTPEQPKGPF GEVIEAFADG
      181 LAGKGKQINT TLNSLSQALN ALNEGRGDFF AVVRSLALFV NALHQDDQQF VALNKNLAEF
      241 TDRLTHSDAD LSNAIQQFDS LLAVARPFFA KNREVLTHDV NNLATVTTTL LQPDPLDGLE
      301 TVLHIFPTLA ANINQLYHPT HGGVVSLSAF TNFANPMEFI CSSIQAGSRL GYQESAELCA
      361 QYLAPVLDAI KFNYFPFGLN VASTASTLPK EIAYSEPRLQ PPNGYKDTTV PGIWVPDTPL
      421 SHRNTQPGWV VAPGMQGVQV GPITQGLLTP ESLAELMGGP DIAPPSSGLQ TPPGPPNAYD
      481 EYPVLPPIGL QAPQVPIPPP PPGPDVIPGP VPPTPAPVGA PLPAEAGGGQ
//