LOCUS AJF01464.1 582 aa PRT BCT 20-JUN-2017
DEFINITION Mycobacterium tuberculosis H37RvSiena putative oxalyl-
CoA decarboxylase OxcA protein.
ACCESSION CP007027-120
PROTEIN_ID AJF01464.1
SOURCE Mycobacterium tuberculosis H37RvSiena
ORGANISM Mycobacterium tuberculosis H37RvSiena
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1 (bases 1 to 4410911)
AUTHORS Santoro,F., Guerrini,V., Lazzeri,E., Iannelli,F. and Pozzi,G.
TITLE Genomic polymorphisms in a Laboratory Isolate of Mycobacterium
tuberculosis Reference Strain H37Rv (ATCC27294)
JOURNAL New Microbiol. 40 (1), 62-69 (2017)
PUBMED 27819398
REFERENCE 2 (bases 1 to 4410911)
AUTHORS Guerrini,V., Santoro,F. and Pozzi,G.
TITLE Direct Submission
JOURNAL Submitted (30-DEC-2013) Medical Biotechnology, University of Siena,
viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
REFERENCE 3 (bases 1 to 4410911)
AUTHORS Guerrini,V., Santoro,F. and Pozzi,G.
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2015) Medical Biotechnology, University of Siena,
viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
REMARK Protein update by submitter
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation modified by submitter.
##Assembly-Data-START##
Assembly Method :: Ray v. 2.3.1
Coverage :: 300
Sequencing Technology :: Illumina
##Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 12/30/2013 09:28:23
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 2.3 (rev. 422554)
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 4,146
CDS :: 4,050
Pseudo Genes :: 42
CRISPR Arrays :: 2
rRNAs :: 3 (5S, 16S, 23S)
tRNAs :: 45
ncRNA :: 6
Frameshifted Genes :: 34
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37RvSiena"
/mol_type="genomic DNA"
/strain="H37RvSiena"
/db_xref="taxon:1437856"
protein /gene="oxcA"
/locus_tag="Y980_0118c"
/experiment="EXISTENCE: identified in proteomics study"
/note="Rv0118c, (MTV031.12c), Len: 582 aa. Probable
oxcA,oxalyl-CoA decarboxylase, highly similar to many e.g.
P78093|OXC_ECOLI|7449483|B65011|YFDU|B2373|Z3637|ECS325
probable oxalyl-CoA decarboxylase from Escherichia coli
(564 aa); M77128|OXAOXA_1 oxalyl-CoA decarboxylase from
Oxalobacter formigenes (568 aa). Also similar to
mycobacterial IlvB proteins e.g. MLCB1788.46c unknown
TPP-requiring enzyme from Mycobacterium leprae (548 aa);
and AL0086|MLCB1788_19 from Mycobacterium leprae (548
aa)."
/transl_table=11
/db_xref="GOA:L7N5Z3"
/db_xref="InterPro:IPR011766"
/db_xref="InterPro:IPR012000"
/db_xref="InterPro:IPR012001"
/db_xref="InterPro:IPR017660"
/db_xref="UniProtKB/TrEMBL:L7N5Z3"
BEGIN
1 MTTRSASPCT VLTDGCHLVV DALKANDVDT IYGVVGIPIT DLARAAQASG IRYIGFRHEA
61 SAGNAAAAAG FLTARPGVCL TTSGPGFLNG LPALANATTN CFPMIQISGS SSRPMVDLQR
121 GDYQDLDQLN AARPFVKAAY RIGQVQDIGR GVARAIRTAT SGRPGGVYLD IPGDVLGQAV
181 EASAASGAIW RPVDPAPRLL PAPEAIDRAL DVLAQAQRPL LVLSKGAAYA QADNVIREFV
241 EHTGIPFLPM SMAKGLLPDS HPQSAAAARS LAMARADVVL LVGARLNWLL GNGESPQWSA
301 DAKFIQVDIE ASEFDSNRPI VAPLTGDIGS VMSALLEAAA DRSSVASAAW TGELADRKAR
361 NSAKMRRRLA DDHHPMRFYN ALGAIRSVLQ RNPDVYVVNE GANALDLARN IIDMHLPRHR
421 LDSGTWGVMG IGMGYAIAAA VETGRPVVAI EGDSAFGFSG MEFETICRYR LPVTVVILNN
481 GGVYRGDEAT IFRSAAPVWR HDPAPTVLNA HARHELIAEA FGGKGYHVST PTELESALTD
541 ALASNGPSLI DCELDPADGV ESGHLAKLNT TSAATPAISG DG
//