LOCUS       AJF01458.1               318 aa    PRT              BCT 20-JUN-2017
DEFINITION  Mycobacterium tuberculosis H37RvSiena putative GDP-mannose
            4,6-dehydratase Gca (GDP-D-mannose dehydratase) protein.
ACCESSION   CP007027-114
PROTEIN_ID  AJF01458.1
SOURCE      Mycobacterium tuberculosis H37RvSiena
  ORGANISM  Mycobacterium tuberculosis H37RvSiena
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1  (bases 1 to 4410911)
  AUTHORS   Santoro,F., Guerrini,V., Lazzeri,E., Iannelli,F. and Pozzi,G.
  TITLE     Genomic polymorphisms in a Laboratory Isolate of Mycobacterium
            tuberculosis Reference Strain H37Rv (ATCC27294)
  JOURNAL   New Microbiol. 40 (1), 62-69 (2017)
   PUBMED   27819398
REFERENCE   2  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2013) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
REFERENCE   3  (bases 1 to 4410911)
  AUTHORS   Guerrini,V., Santoro,F. and Pozzi,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2015) Medical Biotechnology, University of Siena,
            viale Bracci, Policlinico Le Scotte, Siena 53100, Italy
  REMARK    Protein update by submitter
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            Annotation modified by submitter.
            
            ##Assembly-Data-START##
            Assembly Method       :: Ray v. 2.3.1
            Coverage              :: 300
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 12/30/2013 09:28:23
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 422554)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,146
            CDS                          :: 4,050
            Pseudo Genes                 :: 42
            CRISPR Arrays                :: 2
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNA                        :: 6
            Frameshifted Genes           :: 34
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis H37RvSiena"
                     /mol_type="genomic DNA"
                     /strain="H37RvSiena"
                     /db_xref="taxon:1437856"
     protein         /gene="gca"
                     /locus_tag="Y980_0112"
                     /inference="protein motif:PROSITE:PS00061"
                     /note="Rv0112, (MTV031.06) Possible gca,GDP-mannose
                     4,6-dehydratase, similar to others e g. U18320|PAU18320_1
                     GDP-D-mann from Pseudomonas aeruginosa (323 aa). Similar
                     to Rv3634c, Rv3784,etc from Mycobacterium tuberculosis.
                     Contains PS00061 Short-chain dehydrogenases/reductases
                     family signature. Seems to belong to the GDP-mannose
                     4,6-dehydratase family. Cofactor: NAD(+). This region is a
                     possible MT-complex-specific genomic island (See Becq et
                     al.,2007)."
                     /transl_table=11
                     /db_xref="GOA:L7N5R0"
                     /db_xref="InterPro:IPR001509"
                     /db_xref="InterPro:IPR016040"
                     /db_xref="InterPro:IPR020904"
                     /db_xref="UniProtKB/TrEMBL:L7N5R0"
BEGIN
        1 MKVWITGAGG MMGSHLAEML LAAGHDVYAT YCRPTIDPSD LQFNGAEVDI TDWCSVYDSI
       61 ATFRPDAVFH LAAQSYPAVS WARPVETLTT NMVGTAIVFE ALRRVRPHAK IIVAGSSAEY
      121 GFVDPSEVPI NERRELRPLH PYGVSKAATD MLAYQYHKSY GMHTVVARIF NCTGPRKVGD
      181 ALSDFVRRCT WLEHHPEQSA IRVGNLKTKR TIVDVRDLNR ALMLMLDKGE AGADYNVGGS
      241 IAYEMGDVLK QVIAACKRDD IVPEVDPALL RPTDEKIIYG DCSKLAAITG WQQEICLTQT
      301 IADMFDYWRS KSESALMV
//