LOCUS AJC74095.1 429 aa PRT BCT 19-SEP-2017 DEFINITION Pseudothermotoga hypogea DSM 11164 = NBRC 106472 tRNA (uracil-5-)-methyltransferase protein. ACCESSION CP007141-1504 PROTEIN_ID AJC74095.1 SOURCE Pseudothermotoga hypogea DSM 11164 = NBRC 106472 ORGANISM Pseudothermotoga hypogea DSM 11164 = NBRC 106472 Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga. REFERENCE 1 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Genome sequencing of Thermotog hypogea JOURNAL Unpublished REFERENCE 2 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Direct Submission JOURNAL Submitted (17-JAN-2014) Department of Biology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.6 Genome Coverage :: 56X Sequencing Technology :: 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/17/2014 14:13:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.3 (rev. 423251) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 2,168 CDS :: 2,097 Pseudo Genes :: 21 CRISPR Arrays :: 4 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 46 ncRNA :: 1 Frameshifted Genes :: 9 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudothermotoga hypogea DSM 11164 = NBRC 106472" /mol_type="genomic DNA" /strain="DSM 11164 = NBRC 106472" /isolation_source="an African oil producing well" /culture_collection="DSM:11164" /type_material="type strain of Pseudothermotoga hypogea" /db_xref="taxon:1123384" /country="Cameroon" /collection_date="1979" protein /gene="gid" /locus_tag="AJ81_07815" /inference="EXISTENCE: similar to AA sequence:RefSeq:YP_002334301.1" /note="TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKVHVVGAGL AGSEVAYQLA IRGIEVILHE MRPAKMTPVH RTGFFAELVC SNSLKSEELH 61 NASGLLKREM ELFGSLTLRI AKECRVPAGK ALAVNRERFS TRVTEEVLKS GVQLVVEEVS 121 EIPDDGNVWV IATGPATSES LANWLNEKLG NALYFFDAVA PIIAADSIDY SKVFFADRYG 181 AGTSDYINCP MNEEQYERFY EALLSAEVVP IEGFDSCMLF ERCKPIEEIA RSGKMSLLFG 241 PLRPVGLIDP RTNRQPYAVV QLRKENVEGT MYNIVGFQTR LKWPEQKRVI RLIPGLENAE 301 ILRYGVMHRN FYVNSRKVLD CHFRLKGTEK IFFAGQITGV EGYVESAASG LYVALNIYRY 361 LKRQSLLKLP TTTMMGSLFD YVCNGIADQL QPMYANYGLL KDSRDRQRAA ERSLRDLERF 421 LVEAGWREG //