LOCUS       AJC74095.1               429 aa    PRT              BCT 19-SEP-2017
DEFINITION  Pseudothermotoga hypogea DSM 11164 = NBRC 106472 tRNA
            (uracil-5-)-methyltransferase protein.
ACCESSION   CP007141-1504
PROTEIN_ID  AJC74095.1
SOURCE      Pseudothermotoga hypogea DSM 11164 = NBRC 106472
  ORGANISM  Pseudothermotoga hypogea DSM 11164 = NBRC 106472
            Bacteria; Thermotogae; Thermotogales; Thermotogaceae;
            Pseudothermotoga.
REFERENCE   1  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Genome sequencing of Thermotog hypogea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2014) Department of Biology, University of
            Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1,
            Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 56X
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/17/2014 14:13:17
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,168
            CDS                          :: 2,097
            Pseudo Genes                 :: 21
            CRISPR Arrays                :: 4
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 46
            ncRNA                        :: 1
            Frameshifted Genes           :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudothermotoga hypogea DSM 11164 = NBRC
                     106472"
                     /mol_type="genomic DNA"
                     /strain="DSM 11164 = NBRC 106472"
                     /isolation_source="an African oil producing well"
                     /culture_collection="DSM:11164"
                     /type_material="type strain of Pseudothermotoga hypogea"
                     /db_xref="taxon:1123384"
                     /country="Cameroon"
                     /collection_date="1979"
     protein         /gene="gid"
                     /locus_tag="AJ81_07815"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:YP_002334301.1"
                     /note="TrmFO; Gid; glucose-inhibited division protein;
                     similar to GidA; the gene from Bacillus subtilis encodes a
                     tRNA-methyltransferase that utilizes folate as the carbon
                     donor and bound flavin as reductant; modifies tRNA at
                     position 54 (uridine) of the T-psi loop to form a
                     C5-methyluridine; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKVHVVGAGL AGSEVAYQLA IRGIEVILHE MRPAKMTPVH RTGFFAELVC SNSLKSEELH
       61 NASGLLKREM ELFGSLTLRI AKECRVPAGK ALAVNRERFS TRVTEEVLKS GVQLVVEEVS
      121 EIPDDGNVWV IATGPATSES LANWLNEKLG NALYFFDAVA PIIAADSIDY SKVFFADRYG
      181 AGTSDYINCP MNEEQYERFY EALLSAEVVP IEGFDSCMLF ERCKPIEEIA RSGKMSLLFG
      241 PLRPVGLIDP RTNRQPYAVV QLRKENVEGT MYNIVGFQTR LKWPEQKRVI RLIPGLENAE
      301 ILRYGVMHRN FYVNSRKVLD CHFRLKGTEK IFFAGQITGV EGYVESAASG LYVALNIYRY
      361 LKRQSLLKLP TTTMMGSLFD YVCNGIADQL QPMYANYGLL KDSRDRQRAA ERSLRDLERF
      421 LVEAGWREG
//