LOCUS AJC73930.1 344 aa PRT BCT 19-SEP-2017 DEFINITION Pseudothermotoga hypogea DSM 11164 = NBRC 106472 transcription elongation factor NusA protein. ACCESSION CP007141-1293 PROTEIN_ID AJC73930.1 SOURCE Pseudothermotoga hypogea DSM 11164 = NBRC 106472 ORGANISM Pseudothermotoga hypogea DSM 11164 = NBRC 106472 Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga. REFERENCE 1 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Genome sequencing of Thermotog hypogea JOURNAL Unpublished REFERENCE 2 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Direct Submission JOURNAL Submitted (17-JAN-2014) Department of Biology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.6 Genome Coverage :: 56X Sequencing Technology :: 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/17/2014 14:13:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.3 (rev. 423251) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 2,168 CDS :: 2,097 Pseudo Genes :: 21 CRISPR Arrays :: 4 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 46 ncRNA :: 1 Frameshifted Genes :: 9 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudothermotoga hypogea DSM 11164 = NBRC 106472" /mol_type="genomic DNA" /strain="DSM 11164 = NBRC 106472" /isolation_source="an African oil producing well" /culture_collection="DSM:11164" /type_material="type strain of Pseudothermotoga hypogea" /db_xref="taxon:1123384" /country="Cameroon" /collection_date="1979" protein /gene="nusA" /locus_tag="AJ81_06715" /inference="EXISTENCE: similar to AA sequence:RefSeq:YP_002941223.1" /note="modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNLNLLEALE QLEEEKGISK DEIMEILEKA LVSAYKKNFG TSKNVEVKID RMTGDIQLYQ 61 VFDVVENVTD ELTQISLEDA RKIDPLAEIG KKIYKKISVK EFGRIAAQTA KQVLIQRIRE 121 LEKERQYEHY SELAGSVTTC EVIRVTADWA DIRVGKIETR LMKRDWIPGE TIKPGDLIKV 181 YVVDVLKDRK GPKILVSRSV PEFVIGLFKL EVPEVENGIV QVKAIAREPG VRTKIGVIST 241 NPQVDPVGAC IGEGGSRISS ILKELRGEKV DVFKWVDDPK QLIANALAPA SVVSVEILDA 301 ERKAARVLVP PTQLSLAIGK GGQNARLAVK VTGWKIDIKP VMNV //