LOCUS       AJC73516.1               658 aa    PRT              BCT 19-SEP-2017
DEFINITION  Pseudothermotoga hypogea DSM 11164 = NBRC 106472 excinuclease
            ABC subunit B protein.
ACCESSION   CP007141-781
PROTEIN_ID  AJC73516.1
SOURCE      Pseudothermotoga hypogea DSM 11164 = NBRC 106472
  ORGANISM  Pseudothermotoga hypogea DSM 11164 = NBRC 106472
            Bacteria; Thermotogae; Thermotogales; Thermotogaceae;
            Pseudothermotoga.
REFERENCE   1  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Genome sequencing of Thermotog hypogea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2014) Department of Biology, University of
            Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1,
            Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 56X
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/17/2014 14:13:17
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,168
            CDS                          :: 2,097
            Pseudo Genes                 :: 21
            CRISPR Arrays                :: 4
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 46
            ncRNA                        :: 1
            Frameshifted Genes           :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudothermotoga hypogea DSM 11164 = NBRC
                     106472"
                     /mol_type="genomic DNA"
                     /strain="DSM 11164 = NBRC 106472"
                     /isolation_source="an African oil producing well"
                     /culture_collection="DSM:11164"
                     /type_material="type strain of Pseudothermotoga hypogea"
                     /db_xref="taxon:1123384"
                     /country="Cameroon"
                     /collection_date="1979"
     protein         /locus_tag="AJ81_04070"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:YP_001471667.1"
                     /note="The UvrABC repair system catalyzes the recognition
                     and processing of DNA lesions. The beta-hairpin of the
                     Uvr-B subunit is inserted between the strands, where it
                     probes for the presence of a lesion; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MFELISDFEP TGDQPQAIEK LVEGILKGYR FQTLIGVTGS GKTFTMANVI ARLNRPALVI
       61 SPNKTLAAQL YGEFKTFFPK NRVEYFISYY DYYQPEAYVP SKDLYIEKNA DINDVLVRMR
      121 MSTFKSVRTR RDVVVVASVS CIYASGDPTD FDTMNIQLHV GQRIDPHEVA QKLARIGYSR
      181 SSEITLKGCF RLAGDVLEIY PTYQDEGIRV EFFGSNVDRI ESFDKMNRTS IEEYQKITIY
      241 PAVEFITTEE KLRRAVESIE EELKERLEEL KRQGKLLEMQ RLQQRTMHDL ELLMSIGHCP
      301 GIENYSRHFD ARKPGEPPYT LLDYFDEDFI VFIDESHIAV PQLRAMWRGE FSRKKNLVDY
      361 GFRLPSAYDN RPLTFEEFLK KVPQIIFVSA TPGPFELQVS EQVVEQLIRP TGLVDPEVEV
      421 RPTKGQIDDL VFEIRKVVER GERALVTVLT KKTAERLSEY LTELGIRSLY IHSELDAIER
      481 IEVLKKLRRG DVDVVVGINL LREGLDLPEV SLVAIMDCDK EGFLRSETTL IQIMGRVARN
      541 LNGKVLMYAD RITPAMQRAI EETNRRRKIQ IEYNRKHNIT PKPIIKPLQI EIFERFIEEK
      601 PKLEYLDLVK DLSLEERIAI LEEEMYRAAS ELRYEDAAVL RDEIFRLKEE LRKNETHL
//