LOCUS AJC73102.1 384 aa PRT BCT 19-SEP-2017 DEFINITION Pseudothermotoga hypogea DSM 11164 = NBRC 106472 diaminopimelate decarboxylase protein. ACCESSION CP007141-297 PROTEIN_ID AJC73102.1 SOURCE Pseudothermotoga hypogea DSM 11164 = NBRC 106472 ORGANISM Pseudothermotoga hypogea DSM 11164 = NBRC 106472 Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga. REFERENCE 1 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Genome sequencing of Thermotog hypogea JOURNAL Unpublished REFERENCE 2 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Direct Submission JOURNAL Submitted (17-JAN-2014) Department of Biology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.6 Genome Coverage :: 56X Sequencing Technology :: 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/17/2014 14:13:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.3 (rev. 423251) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 2,168 CDS :: 2,097 Pseudo Genes :: 21 CRISPR Arrays :: 4 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 46 ncRNA :: 1 Frameshifted Genes :: 9 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudothermotoga hypogea DSM 11164 = NBRC 106472" /mol_type="genomic DNA" /strain="DSM 11164 = NBRC 106472" /isolation_source="an African oil producing well" /culture_collection="DSM:11164" /type_material="type strain of Pseudothermotoga hypogea" /db_xref="taxon:1123384" /country="Cameroon" /collection_date="1979" protein /locus_tag="AJ81_01560" /inference="EXISTENCE: similar to AA sequence:RefSeq:YP_004661077.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDSSILLSAA EVFGTPFYFY DLDFIRDRVR KVYDFFNQFD FHLAYAVKAN FNFEILSMLN 61 ELGTMVDVVS FGEYERVRKA GFTPERIVVN GNCKSVGELK KYVEDSVYCI NLDSLEELLR 121 LESIADRPVR VAIRVNPDVD PKTHHHIATG LKENKFGVDY DTAERMIQII SRSRFVRLVG 181 LHCHIGSQIV EVDPYRQAFE SMRDFASKLN LQLELVNLGG GWGIDYGDGK QLDLEEYRRN 241 VFPILEDFNC RIVLELGRWI VGPAGYLISK VEYVKKTKNK NFIVIDAGMS HLIRPALYGA 301 KHRIEPLYEQ KDRPTIVADV VGPVCESADT FAKNLELPEP QEGELLIIRD VGAYGYVMSS 361 HYNLLRRAPE ILYSKETGFR VSSA //