LOCUS AJC73010.1 399 aa PRT BCT 19-SEP-2017 DEFINITION Pseudothermotoga hypogea DSM 11164 = NBRC 106472 elongation factor Tu protein. ACCESSION CP007141-195 PROTEIN_ID AJC73010.1 SOURCE Pseudothermotoga hypogea DSM 11164 = NBRC 106472 ORGANISM Pseudothermotoga hypogea DSM 11164 = NBRC 106472 Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga. REFERENCE 1 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Genome sequencing of Thermotog hypogea JOURNAL Unpublished REFERENCE 2 (bases 1 to 2165416) AUTHORS Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and Ma,K. TITLE Direct Submission JOURNAL Submitted (17-JAN-2014) Department of Biology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1, Canada COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.6 Genome Coverage :: 56X Sequencing Technology :: 454 GS FLX Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/17/2014 14:13:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.3 (rev. 423251) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 2,168 CDS :: 2,097 Pseudo Genes :: 21 CRISPR Arrays :: 4 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 46 ncRNA :: 1 Frameshifted Genes :: 9 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudothermotoga hypogea DSM 11164 = NBRC 106472" /mol_type="genomic DNA" /strain="DSM 11164 = NBRC 106472" /isolation_source="an African oil producing well" /culture_collection="DSM:11164" /type_material="type strain of Pseudothermotoga hypogea" /db_xref="taxon:1123384" /country="Cameroon" /collection_date="1979" protein /gene="tuf" /locus_tag="AJ81_01015" /EC_number="3.6.5.3" /inference="EXISTENCE: similar to AA sequence:RefSeq:YP_001470207.1" /note="EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAKEKFVRTK PHVNVGTIGH IDHGKTTLTA AITKYLSFKG LANYVPFEQI DKAPEEKARG 61 ITINITHVEY QTEKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAATD GPMPQTREHV 121 LLARQVNVPY IVVFLNKVDA VDDPELIDLV EMEVRELLSK YEFPGDEVPV IRGSALKALE 181 ANDPNDPAYK AIQELLDALD NYIPEPVRDV DKPFLMAIED VFSITGRGTV VTGRIERGRI 241 RPGDEVEIVG LSYETRKTVV TSVEMFRKEL EEGIAGDNVG CLLRGIDKDE VERGQVLAAP 301 GSITPHTTFK ANVYVLKKEE GGRHTPFMKG YRPQFYIRTA DVTGEILELG NNAEMVMPGD 361 NAILTIKLIY PVAIEKGMRF AIREGGRTVG AGVVAEIVE //