LOCUS AGF91506.1 2657 aa PRT HTG 26-FEB-2013
DEFINITION Cyanophage P-SS1 hypothetical protein protein.
ACCESSION JF974306-211
PROTEIN_ID AGF91506.1
SOURCE Cyanophage P-SS1
ORGANISM Cyanophage P-SS1
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
Caudoviricetes; Kyanoviridae; Ronodorvirus; Ronodorvirus ssm4.
REFERENCE 1 (bases 1 to 178284)
AUTHORS Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
Haas,B., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Cyanophage P-SS1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 178284)
AUTHORS Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
Haas,B., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: double dilution series
Template preparation method :: lysate
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: Not available
Phage/virus taxonomy :: Siphoviridae
Phage/virus strain :: Not available
Morphology :: Siphovirus
Latitude :: 38.10 N
Longitude :: 73.09 W
Depth (m) :: 60.00
Salinity (psu) :: 36.50
Temperature (C) :: 22.40
Collection date :: 12-Dec-2001
Sample collection site :: slope
Habitat description :: open ocean
Other metadata available :: Binder cruise
Lab Host :: Prochlorococcus marinus str.
MIT 9313
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 2 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 150061: contig of 150061 bp in length
* 150062 150161: gap of unknown length
* 150162 178284: contig of 28123 bp in length.
FEATURES Qualifiers
source /organism="Cyanophage P-SS1"
/mol_type="genomic DNA"
/strain="P-SS1"
/isolation_source="slope"
/db_xref="taxon:889957"
/lab_host="Prochlorococcus marinus str. MIT 9313"
/lat_lon="38.10 N 73.09 W"
/collection_date="12-Dec-2001"
protein /locus_tag="CPYG_00212"
/transl_table=11
BEGIN
1 MANRLQLRRG GAQEWANANP TLAQGELGIE LDTGRFKIGD GVSAWNTLRY ERPVESTSNT
61 ANTLVQRDAD GNFAAGTITA TVIGNASTAA RLASTRQIQI SGDLTATGNF DGSQNLNLAS
121 SLELIPTLPH YDGTASASGT YTKVTVDSKG RITNASFPST LADYNLNGTV EGSSAQPYDL
181 DLVAIAGLTT TGMISRTSGG NMATRTITGT PTRISIVNGN GVSGNPTIDL ITTAVVPGNY
241 NTESLTSVNA VGSSSEPFGT QTVNAVKFTV DDRGRLTSAT NVPIATAVEG TTALDYNAAT
301 SYSRYAIIKN ASKVYQAYQA ISAGAGAPTH TSGDNGGWRY LAAESTEQKG LASFAQEDFD
361 VASGHVSIAA AGVDNTQLQN NRVSFADGNS VEHFELDQEL TATTGYRGFT GINYVNVKNT
421 SGGLLFAANN TGDSGNGEVD INVKTLISDP DVVFDGATAQ TIDKTGDGNL TIQTTQSSSS
481 ARSLSIAATN SGSGTSTVSI TAEDVVDIQA SDASTGKVHV ENMRIQGDHL ASTGTLKLDP
541 GDDRAVTGLV QILGNLQVDG TTTTVNSTTT TVDDPVFTLG GDTAPTTDDN KDRGIEFRYY
601 DSQARLGFFG YDDSYADLGG HTGGFAFLYN ASQSSAEIFT GTDAGIRAGN LKLTTNTNST
661 SNTTGDLVVA GGVGIGDDVN IGGLLDVDGT FRANSTSRFD DNIVFQGASK TLELKNGSGT
721 TKTTLHTTTG NVDVGGILTV TGAIDANSSA AISGDVHLES TNDITTAKNG TTGAWEIQSS
781 DYGALRLDGG FYVAGSGLID GTLHVNGPIE VKDSATETES RLNWLRVRYR GRFGDTYQAS
841 PSYASHNFST IKAHGGAGIM KSLYVGATGS GERFSVGKLN SGDTEKFSVI GASGNTDIQG
901 TLNVEGNTTI QDSVTINASN ENFKIQNGSA VDKFTVDTDN GNTVIEGTVN INGVTDVDAD
961 FAVRNGTTDK FFVASSTGNT NIEGTLTADG HTELNSTLNV DSNTTIGGTL EVTNNTEING
1021 TLDVDANFAV RSGTTDKMTV ASSTGNIATD GTLVVAGQTT INDSLIIQSD NEVVNVNNGS
1081 GVNKFSIDTD NGNTNIIGTL TVGDATQIND TFGTSGVNTF TNNTEQTLTG TYAADGAVRL
1141 TGGAGIGKNL AVGGGLRVYG GTELSGALDL NSSANISGST IVENQLIVKA DNKFFKVQTA
1201 GAVDKFTIDT DNGNTVSQGD LTVAGDVNAQ SNLIVTGNLT VNGTTSTVNS TTVTIDDPVF
1261 TLGGDTAPAS NDGKDRGIEF RYFDGSAKLG FFGFDRSTQE FAFLTTATNS SEVFSGTDAA
1321 LRIGSLNVTG AGTSVDIDNN LNVDGTATVD GQIISQLPQG TAPFVVASST KVNNLNADFL
1381 DGLTTSATDT TGNSVVTRAS GNFSAGQITA ATGTGAAAGF LGNASTADAW KTARTLTIDG
1441 VVDGSVSING ASDPTLTVTF NDADITALAA QSGTGYMVRT AANTYAHRTF SVTASSGITL
1501 TNADGVSGNT TINVASASTN AANNLVLRDG SGNFASNVIT ATSFSGNLIK SSTSAKDIKP
1561 ESNSTYDLGS SALQWANIHA DAANIDTVTG NLTGNVTGNL VAATTQAKDI DPALNSTYDL
1621 GSSSLKWANI HADAASIGTT TGNVTGNLTG NLVAATTEAK DIDPALNSTY DLGSSSLKWA
1681 NIHADAAAIA TTTGNLTGNV TGNLVAATTE SKNIVPDLNA TYDLGSSTKQ WSNIHADAGN
1741 IDAITGNLTG NVTGNLLAAT TLAKDIKPDA NSTYDLGSST LKWQNIYADA AAIATTTGNV
1801 IGNLTGNLLA STTQAKDIKP ALNSTYDLGS SSLKWQDIFA DAASIGTVTG NVTGNLTGNL
1861 EASTTQAKDI DPALNSTYDL GSASLKWQRI FADAATISTT TGNLTGNVTG NLVANTTESA
1921 NIIPDTNGIY SLGSSTKKYM NVFADAAAIT TITGNLTGTA TQAANINNHD TDALSEGLNN
1981 LYTTAARTRG HFTYGTGIEH DGAGGLAVTQ SDINTDNITE GSTNVFFTDT RADARVAAAT
2041 GANLDLSQKT TTNLAEGTNL YHTEARVQTK LDHAFEQLKA MLNNLATSTT LKLNLSGDPT
2101 PGSVVTLGSI SSNGVGGYTA GTNVATTASA LGTGLTVDTT VNADGAITAI ALNQAGTDYV
2161 IGETITIPNS NLGGVDTLNL GTLSGGVGGF SAGTGVATTN SGSGDDALTV NTTVDGNGAI
2221 TNVVINAAGT GYVAGDTITI TNPNAGGAAT VDTLVGGTGY ANGTAIATTT VGSGSGLTLD
2281 LTTSNGVVTG VAINGAGSGY AVDDTITIVN ANASGVKTLG SIATAGTGYA TGTAIATTND
2341 GSGSNFTVDI SSVDASGAIT AVAINNDGSG YTASDTITIV NANSGGVKTL GTIATGGTGY
2401 AAGSAIATTS SGSGTSLTVD LTVDNGVVTG VTINDDGSGY AASEVITIVN ANASGIKTVG
2461 NFGATDSSRT PGTYTIGTSD YITQASGANA TFTVVIGVGG TVDSITVTDD GSGFIVNETI
2521 TIADAQLGGG GGAALTFDAT AIHGNGCTIP VSAIHGNGCT IPVSEIHGNG ATIDIATIFT
2581 NATVNVATVF TNATFSLSDI TTMEIGATLT GTTSNSSGVI TAMDSTSVTV DNVSGFFKKG
2641 ETVGANDVTN LTISSFG
//