LOCUS AGF91370.1 446 aa PRT HTG 26-FEB-2013
DEFINITION Cyanophage P-SS1 hypothetical protein protein.
ACCESSION JF974306-75
PROTEIN_ID AGF91370.1
SOURCE Cyanophage P-SS1
ORGANISM Cyanophage P-SS1
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
Caudoviricetes; Kyanoviridae; Ronodorvirus; Ronodorvirus ssm4.
REFERENCE 1 (bases 1 to 178284)
AUTHORS Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
Haas,B., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Cyanophage P-SS1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 178284)
AUTHORS Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
Haas,B., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: double dilution series
Template preparation method :: lysate
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: Not available
Phage/virus taxonomy :: Siphoviridae
Phage/virus strain :: Not available
Morphology :: Siphovirus
Latitude :: 38.10 N
Longitude :: 73.09 W
Depth (m) :: 60.00
Salinity (psu) :: 36.50
Temperature (C) :: 22.40
Collection date :: 12-Dec-2001
Sample collection site :: slope
Habitat description :: open ocean
Other metadata available :: Binder cruise
Lab Host :: Prochlorococcus marinus str.
MIT 9313
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 2 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 150061: contig of 150061 bp in length
* 150062 150161: gap of unknown length
* 150162 178284: contig of 28123 bp in length.
FEATURES Qualifiers
source /organism="Cyanophage P-SS1"
/mol_type="genomic DNA"
/strain="P-SS1"
/isolation_source="slope"
/db_xref="taxon:889957"
/lab_host="Prochlorococcus marinus str. MIT 9313"
/lat_lon="38.10 N 73.09 W"
/collection_date="12-Dec-2001"
protein /locus_tag="CPYG_00075"
/transl_table=11
BEGIN
1 MYRDGERLQN KEGAFDLVTF CRGWEIYESI ELHTMEAEFI FEDAAGLMGA LTGTEVFKLE
61 IQSFPVDRTY YFRSYGIYDR IRAGQSNEVY FIKCYSDEFM KNESVNVFGN SEVIFNNNAK
121 AENIIETLVK DKNYIGSSKR LFTEETLNEH SFIAPNWRPF DVIPWVLLRT IRKSQKGGSL
181 QNGFVFFENS LGFHAKSYDK MIEDIEKQRE NSETSPITGQ AKMYQYVHDI KNTESPIDNQ
241 FLIDSVVFPD EATTMTNLRH GIYSGYSVGF DPVSITSSKM GLSKDMSSTA YNYSLEDIWP
301 RMAHLNAGKS VNPLVNMDNN VRGHMYKPKR IRYCGLPNQS FDPKFQNNPQ ASYEQLAELQ
361 AYRYIRKATL NHINLKIRIP GNLDLYPGSG IDIIIPSIAK SGGGFGRSTS IDRKYSGRYL
421 IKTLTHSMTE DIMNTDLELM KDSILR
//