LOCUS AGF91215.1 87 aa PRT HTG 26-FEB-2013
DEFINITION Halorubrum phage GNf2 hypothetical protein protein.
ACCESSION JF974305-29
PROTEIN_ID AGF91215.1
SOURCE Halorubrum phage GNf2
ORGANISM Halorubrum phage GNf2
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
Caudoviricetes; Thumleimavirales; Soleiviridae.
REFERENCE 1 (bases 1 to 82365)
AUTHORS Henn,M.R., Sabet,S., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Halorubrum phage GNf2
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 82365)
AUTHORS Henn,M.R., Sabet,S., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: triple-plaque-purified
Template preparation method :: lysate
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: not applicable
Phage/virus strain :: not applicable
Latitude :: 27.94 N
Longitude :: 114.06 W
Depth (m) :: 0.04
Temperature (C) :: 21.00
pH :: 7.44
Collection date :: 22-Apr-2007
Sample collection site :: solar salterns from commerical
saltworks (ESSA) near Pacific
Ocean
Other collection site info :: water sample was taken from
crystallizer pond #12, one of a
series of ponds that is fed by
the Ojo de Liebre Lagoon
Filter fraction (um) :: not applicable
Volume filtered (L) :: not applicable
Habitat description :: extreme hypersaline
Other metadata available :: not available
References :: PMID: 19418017
Lab Host :: Halorubrum sp.
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 6 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 54246: contig of 54246 bp in length
* 54247 54346: gap of unknown length
* 54347 63132: contig of 8786 bp in length
* 63133 63232: gap of unknown length
* 63233 71291: contig of 8059 bp in length
* 71292 71391: gap of unknown length
* 71392 77338: contig of 5947 bp in length
* 77339 77438: gap of unknown length
* 77439 80007: contig of 2569 bp in length
* 80008 80107: gap of unknown length
* 80108 82365: contig of 2258 bp in length.
FEATURES Qualifiers
source /organism="Halorubrum phage GNf2"
/mol_type="genomic DNA"
/strain="GNf2"
/isolation_source="solar salterns from commerical
saltworks (ESSA) near Pacific Ocean"
/db_xref="taxon:889959"
/lab_host="Halorubrum sp."
/lat_lon="27.94 N 114.06 W"
/collection_date="22-Apr-2007"
protein /locus_tag="HAPG_00029"
/transl_table=11
BEGIN
1 MNLETAPRAD EGEDSECAVC GAQNSFVLYD NDKVCRECQH VRGEATNSSE SLTVWEQWWQ
61 HRETTYSGFR GSERIKMVGG FAAAYDD
//