LOCUS       AFI86382.1              1095 aa    PRT              BCT 27-JUN-2016
DEFINITION  Aggregatibacter actinomycetemcomitans D7S-1 helicase protein.
ACCESSION   CP003496-442
PROTEIN_ID  AFI86382.1
SOURCE      Aggregatibacter actinomycetemcomitans D7S-1
  ORGANISM  Aggregatibacter actinomycetemcomitans D7S-1
            Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Aggregatibacter.
REFERENCE   1  (bases 1 to 2308962)
  AUTHORS   Chen,C., Kittichotirat,W., Chen,W., Downey,J.S., Si,Y. and
            Bumgarner,R.
  TITLE     Genome sequence of naturally competent Aggregatibacter
            actinomycetemcomitans serotype a strain D7S-1
  JOURNAL   J. Bacteriol. 192 (10), 2643-2644 (2010)
   PUBMED   20348265
REFERENCE   2  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R.E. and Chen,C.
  TITLE     Evolutionary Divergence of Aggregatibacter actinomycetemcomitans
  JOURNAL   J. Dent. Res. 95 (1), 94-101 (2016)
   PUBMED   26420795
REFERENCE   3  (bases 1 to 2308962)
  AUTHORS   Chen,C., Kittichotirat,W., Chen,W., Downey,J., Si,Y. and
            Baumgarner,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2010) Microbiology, University of Washington, 960
            Republican St. Rosen Building, Seattle, WA 98109, USA
REFERENCE   4  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R. and Chen,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2012) Department of Microbiology, University of
            Washington, 960 Republican St. Rosen Building, Seattle, WA 98109,
            USA
REFERENCE   5  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R. and Chen,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2014) Division of Periodontolology, Herman Ostrow
            School of Dentistry, University of Southern Californak, 925 W. 34th
            Street, Los Angeles, CA 90089, USA
  REMARK    Sequence update by submitter
COMMENT     On Jun 27, 2016 this sequence version replaced CP003496.1.
            Source of DNA for this strain is available from: Casey Chen,
            Division of Primary Oral Health Care, USC School of Dentistry, 925
            W 34th Street, Los Angeles, CA 90089-0641.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2014
            Assembly Method       :: 454 Newbler assembler v. 2.0.00.22
            Assembly Name         :: AaD7S-1v2.0
            Genome Coverage       :: 17.58x
            Sequencing Technology :: 454 Illumina MiSeq
            ##Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 07/17/2014 13:42:00
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.6 (rev. 440435)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,197
            CDS                          :: 2,041
            Pseudo Genes                 :: 83
            CRISPR Arrays                :: 3
            rRNAs                        :: 19 (5S, 16S, 23S)
            tRNAs                        :: 53
            ncRNA                        :: 1
            Frameshifted Genes           :: 69
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Aggregatibacter actinomycetemcomitans D7S-1"
                     /mol_type="genomic DNA"
                     /strain="D7S-1"
                     /db_xref="taxon:694569"
     protein         /locus_tag="D7S_00547"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_005565377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNILLVSQCQ KNALTETRRI LDQFAERCGD RVWQTPITQA GLDTLHKMLR QTARKNTAVA
       61 CYWTHGKNLT ELLWIVGDKS QFNEEGRVPT NRTKRNILRA EDEGGWLQAY SIQIVTALAA
      121 LLHDLGKANK AFQLKLKPNA PFHADYFRHE WISARLFEAM IAGCKTDQEW LSRLANWAEY
      181 KENWLASLNI DDNEADFSHL PPLARTLIWL ITSHHRLPFS NRLNYGENFK EKTQKDIYLN
      241 QAKWDEFYQS QLYPTEQWVK NAQSTHPNKK QFWQFEHLAT DSLSWQKAMR RWAKKALNHP
      301 TLLAMDFSDP FFLLVSRLCL MVGDHHYSSL DADVNLGDND FREKLIANTD KNHRAKQALD
      361 EHLLGVCKTA VYFSRLLPKL KTELPAVKQH KPFVKRTSIP RFQWQNSAFD LAKSLRAETE
      421 KCGLFSVNLA STGCGKTLGN ARIMYALADP QKGARFTAAL GLRVLTLQTG EALQKKLNLT
      481 EDLLAILVGG SAVKKLYELQ QSKENNGSES IQPWFGENEV YGADFIDSAI EDEKFAAILQ
      541 EPKARKLFYA PIVTCTVDHL ISASETARGG KYIVPMLRLL TSDLILDEPD DFNQEDLPAL
      601 SRLVHLAGLF GSRVLLSSAT LTPDFVAGLF NAYQAGRAIY NRQQGINQAA ICCAWFDEFK
      661 QTSTNCANPE DFMFAHQRFV EKRAEKLCKA SVRRKAQIMP LPPLKKIENQ LFDVVTFAEF
      721 LVQQTIDLHN VHSEYDPATQ KQVSFGLIRF ANIKPMIPLA KQLFQMEMKP AWQDYQIHLC
      781 CYHSKQLLIL RSRLEEKLDR ILNRADSKNA FTQPEVMAAM ANSQTKHQLF IVLGSPVTEV
      841 GRDHDYDWAI VDPSSMRSII QLAGRVWRHR PDKVASQPNI TLLPTNWRGL AGQTGVIFTK
      901 PGFEDANHPL ETHRTEELIP TAQLERIDSI PRITKRLDFR PHFCLADLEH QATADLLNSQ
      961 KVNCVNAYWN NDLSNRFTAN LPLMTRFRKS RTQRNIVCLL DEDGKPYFRE QESAWETPDN
     1021 PQNALPEFRY RSLDGKGGLV KPWLDSSLRL ALMELAERLA EESLLFVALK YATVSLAEDD
     1081 TQWCFNETLG FWQED
//