LOCUS AFI86382.1 1095 aa PRT BCT 27-JUN-2016 DEFINITION Aggregatibacter actinomycetemcomitans D7S-1 helicase protein. ACCESSION CP003496-442 PROTEIN_ID AFI86382.1 SOURCE Aggregatibacter actinomycetemcomitans D7S-1 ORGANISM Aggregatibacter actinomycetemcomitans D7S-1 Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter. REFERENCE 1 (bases 1 to 2308962) AUTHORS Chen,C., Kittichotirat,W., Chen,W., Downey,J.S., Si,Y. and Bumgarner,R. TITLE Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1 JOURNAL J. Bacteriol. 192 (10), 2643-2644 (2010) PUBMED 20348265 REFERENCE 2 (bases 1 to 2308962) AUTHORS Kittichotirat,W., Bumgarner,R.E. and Chen,C. TITLE Evolutionary Divergence of Aggregatibacter actinomycetemcomitans JOURNAL J. Dent. Res. 95 (1), 94-101 (2016) PUBMED 26420795 REFERENCE 3 (bases 1 to 2308962) AUTHORS Chen,C., Kittichotirat,W., Chen,W., Downey,J., Si,Y. and Baumgarner,R. TITLE Direct Submission JOURNAL Submitted (01-MAR-2010) Microbiology, University of Washington, 960 Republican St. Rosen Building, Seattle, WA 98109, USA REFERENCE 4 (bases 1 to 2308962) AUTHORS Kittichotirat,W., Bumgarner,R. and Chen,C. TITLE Direct Submission JOURNAL Submitted (23-APR-2012) Department of Microbiology, University of Washington, 960 Republican St. Rosen Building, Seattle, WA 98109, USA REFERENCE 5 (bases 1 to 2308962) AUTHORS Kittichotirat,W., Bumgarner,R. and Chen,C. TITLE Direct Submission JOURNAL Submitted (18-JUL-2014) Division of Periodontolology, Herman Ostrow School of Dentistry, University of Southern Californak, 925 W. 34th Street, Los Angeles, CA 90089, USA REMARK Sequence update by submitter COMMENT On Jun 27, 2016 this sequence version replaced CP003496.1. Source of DNA for this strain is available from: Casey Chen, Division of Primary Oral Health Care, USC School of Dentistry, 925 W 34th Street, Los Angeles, CA 90089-0641. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 24-MAY-2014 Assembly Method :: 454 Newbler assembler v. 2.0.00.22 Assembly Name :: AaD7S-1v2.0 Genome Coverage :: 17.58x Sequencing Technology :: 454 Illumina MiSeq ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/17/2014 13:42:00 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.6 (rev. 440435) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 2,197 CDS :: 2,041 Pseudo Genes :: 83 CRISPR Arrays :: 3 rRNAs :: 19 (5S, 16S, 23S) tRNAs :: 53 ncRNA :: 1 Frameshifted Genes :: 69 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Aggregatibacter actinomycetemcomitans D7S-1" /mol_type="genomic DNA" /strain="D7S-1" /db_xref="taxon:694569" protein /locus_tag="D7S_00547" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_005565377.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNILLVSQCQ KNALTETRRI LDQFAERCGD RVWQTPITQA GLDTLHKMLR QTARKNTAVA 61 CYWTHGKNLT ELLWIVGDKS QFNEEGRVPT NRTKRNILRA EDEGGWLQAY SIQIVTALAA 121 LLHDLGKANK AFQLKLKPNA PFHADYFRHE WISARLFEAM IAGCKTDQEW LSRLANWAEY 181 KENWLASLNI DDNEADFSHL PPLARTLIWL ITSHHRLPFS NRLNYGENFK EKTQKDIYLN 241 QAKWDEFYQS QLYPTEQWVK NAQSTHPNKK QFWQFEHLAT DSLSWQKAMR RWAKKALNHP 301 TLLAMDFSDP FFLLVSRLCL MVGDHHYSSL DADVNLGDND FREKLIANTD KNHRAKQALD 361 EHLLGVCKTA VYFSRLLPKL KTELPAVKQH KPFVKRTSIP RFQWQNSAFD LAKSLRAETE 421 KCGLFSVNLA STGCGKTLGN ARIMYALADP QKGARFTAAL GLRVLTLQTG EALQKKLNLT 481 EDLLAILVGG SAVKKLYELQ QSKENNGSES IQPWFGENEV YGADFIDSAI EDEKFAAILQ 541 EPKARKLFYA PIVTCTVDHL ISASETARGG KYIVPMLRLL TSDLILDEPD DFNQEDLPAL 601 SRLVHLAGLF GSRVLLSSAT LTPDFVAGLF NAYQAGRAIY NRQQGINQAA ICCAWFDEFK 661 QTSTNCANPE DFMFAHQRFV EKRAEKLCKA SVRRKAQIMP LPPLKKIENQ LFDVVTFAEF 721 LVQQTIDLHN VHSEYDPATQ KQVSFGLIRF ANIKPMIPLA KQLFQMEMKP AWQDYQIHLC 781 CYHSKQLLIL RSRLEEKLDR ILNRADSKNA FTQPEVMAAM ANSQTKHQLF IVLGSPVTEV 841 GRDHDYDWAI VDPSSMRSII QLAGRVWRHR PDKVASQPNI TLLPTNWRGL AGQTGVIFTK 901 PGFEDANHPL ETHRTEELIP TAQLERIDSI PRITKRLDFR PHFCLADLEH QATADLLNSQ 961 KVNCVNAYWN NDLSNRFTAN LPLMTRFRKS RTQRNIVCLL DEDGKPYFRE QESAWETPDN 1021 PQNALPEFRY RSLDGKGGLV KPWLDSSLRL ALMELAERLA EESLLFVALK YATVSLAEDD 1081 TQWCFNETLG FWQED //