LOCUS AER41633.1 257 aa PRT HTG 05-NOV-2011
DEFINITION Oryza sativa f. spontanea CCT+motif+family+protein protein.
ACCESSION JN873132-6
PROTEIN_ID AER41633.1
SOURCE Oryza sativa f. spontanea
ORGANISM Oryza sativa f. spontanea
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 341271)
AUTHORS Yang,L., Li,B., Sui,Y., Chen,J., Shi,J. and Chen,M.
TITLE Comparative Sequence Analysis Revealed Gene Movement of Ghd7 in the
Grass Genomes
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 341271)
AUTHORS Yang,L., Li,B., Sui,Y., Chen,J., Shi,J. and Chen,M.
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2011) State Key Laboratory of Plant Genomics,
Institute of Genetics and Developmental Biology, Chinese Academy of
Science, West Lincui Road, Chaoyang District, Beijing, Beijing
100101, P.R. China
COMMENT * NOTE: This is a 'working draft' sequence. It currently
* consists of 55 contigs. Gaps between the contigs
* are represented as runs of N. The order of the pieces
* is believed to be correct as given, however the sizes
* of the gaps between them are based on estimates that have
* provided by the submitter.
* This sequence will be replaced
* by the finished sequence as soon as it is available and
* the accession number will be preserved.
* 1 501: contig of 501 bp in length
* 502 601: gap of unknown length
* 602 2047: contig of 1446 bp in length
* 2048 2147: gap of unknown length
* 2148 5065: contig of 2918 bp in length
* 5066 5165: gap of unknown length
* 5166 5692: contig of 527 bp in length
* 5693 5792: gap of unknown length
* 5793 7390: contig of 1598 bp in length
* 7391 7490: gap of unknown length
* 7491 10251: contig of 2761 bp in length
* 10252 10351: gap of unknown length
* 10352 14766: contig of 4415 bp in length
* 14767 14866: gap of unknown length
* 14867 15772: contig of 906 bp in length
* 15773 15872: gap of unknown length
* 15873 16548: contig of 676 bp in length
* 16549 16648: gap of unknown length
* 16649 18145: contig of 1497 bp in length
* 18146 18245: gap of unknown length
* 18246 31295: contig of 13050 bp in length
* 31296 31395: gap of unknown length
* 31396 113219: contig of 81824 bp in length
* 113220 113319: gap of unknown length
* 113320 126508: contig of 13189 bp in length
* 126509 126608: gap of unknown length
* 126609 141580: contig of 14972 bp in length
* 141581 141680: gap of unknown length
* 141681 145425: contig of 3745 bp in length
* 145426 145525: gap of unknown length
* 145526 151523: contig of 5998 bp in length
* 151524 151623: gap of unknown length
* 151624 165922: contig of 14299 bp in length
* 165923 166022: gap of unknown length
* 166023 184183: contig of 18161 bp in length
* 184184 184283: gap of unknown length
* 184284 204831: contig of 20548 bp in length
* 204832 204931: gap of unknown length
* 204932 208044: contig of 3113 bp in length
* 208045 208144: gap of unknown length
* 208145 209404: contig of 1260 bp in length
* 209405 209504: gap of unknown length
* 209505 210949: contig of 1445 bp in length
* 210950 211049: gap of unknown length
* 211050 216276: contig of 5227 bp in length
* 216277 216376: gap of unknown length
* 216377 223045: contig of 6669 bp in length
* 223046 223145: gap of unknown length
* 223146 223305: contig of 160 bp in length
* 223306 223405: gap of unknown length
* 223406 237214: contig of 13809 bp in length
* 237215 237314: gap of unknown length
* 237315 237823: contig of 509 bp in length
* 237824 237923: gap of unknown length
* 237924 239050: contig of 1127 bp in length
* 239051 239150: gap of unknown length
* 239151 239408: contig of 258 bp in length
* 239409 239508: gap of unknown length
* 239509 243297: contig of 3789 bp in length
* 243298 243397: gap of unknown length
* 243398 256137: contig of 12740 bp in length
* 256138 256237: gap of unknown length
* 256238 256388: contig of 151 bp in length
* 256389 256488: gap of unknown length
* 256489 257552: contig of 1064 bp in length
* 257553 257652: gap of unknown length
* 257653 273183: contig of 15531 bp in length
* 273184 273283: gap of unknown length
* 273284 280883: contig of 7600 bp in length
* 280884 280983: gap of unknown length
* 280984 282228: contig of 1245 bp in length
* 282229 282328: gap of unknown length
* 282329 282344: contig of 16 bp in length
* 282345 282444: gap of unknown length
* 282445 290365: contig of 7921 bp in length
* 290366 290465: gap of unknown length
* 290466 291511: contig of 1046 bp in length
* 291512 291611: gap of unknown length
* 291612 303663: contig of 12052 bp in length
* 303664 303763: gap of unknown length
* 303764 305475: contig of 1712 bp in length
* 305476 305575: gap of unknown length
* 305576 311616: contig of 6041 bp in length
* 311617 311716: gap of unknown length
* 311717 312508: contig of 792 bp in length
* 312509 312608: gap of unknown length
* 312609 314253: contig of 1645 bp in length
* 314254 314353: gap of unknown length
* 314354 315134: contig of 781 bp in length
* 315135 315234: gap of unknown length
* 315235 315786: contig of 552 bp in length
* 315787 315886: gap of unknown length
* 315887 316909: contig of 1023 bp in length
* 316910 317009: gap of unknown length
* 317010 318881: contig of 1872 bp in length
* 318882 318981: gap of unknown length
* 318982 320427: contig of 1446 bp in length
* 320428 320527: gap of unknown length
* 320528 333493: contig of 12966 bp in length
* 333494 333593: gap of unknown length
* 333594 335197: contig of 1604 bp in length
* 335198 335297: gap of unknown length
* 335298 335972: contig of 675 bp in length
* 335973 336072: gap of unknown length
* 336073 337696: contig of 1624 bp in length
* 337697 337796: gap of unknown length
* 337797 340663: contig of 2867 bp in length
* 340664 340763: gap of unknown length
* 340764 341271: contig of 508 bp in length.
FEATURES Qualifiers
source /organism="Oryza sativa f. spontanea"
/mol_type="genomic DNA"
/db_xref="taxon:2998809"
/chromosome="7"
/clone="BAC OR_BBa95E20/OR_BBa128I03/OR_BBa33E21"
/note="forma: spontanea"
protein /gene="Ghd7"
intron_pos 149:0 (1/1)
BEGIN
1 MSMGPAAGEG CGLCGADGGG CCSRHRHDDD GFPFVFPPSA CQGIGAPAPP VHEFQFFGND
61 GGGDDGESVA WLFDDYPPPS PVAAAAGMHH RQPPYDGVVA PPSLFRRNTG AGGLTFDVSL
121 GGRPDLDAGL GLGGGSGRHA EAAASATIMS YCGSTFTDAA SSMPKEMVPA MADVGESLNP
181 NTVVGAMVER EAKLMRYKEK RKKRCYEKQI RYASRKAYAE MRPRVRGRFA KEPDQEAVAP
241 PSTYVDPSRL ELGQWFR
//