LOCUS AEP16156.1 2754 aa PRT HTG 22-FEB-2012
DEFINITION Emiliania huxleyi virus 208 hypothetical protein protein.
ACCESSION JF974318-278
PROTEIN_ID AEP16156.1
SOURCE Emiliania huxleyi virus 208
ORGANISM Emiliania huxleyi virus 208
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota;
Megaviricetes; Algavirales; Phycodnaviridae; Coccolithovirus.
REFERENCE 1 (bases 1 to 411003)
AUTHORS Nissimov,J.I., Worthy,C.A., Rooks,P., Napier,J.A., Kimmance,S.A.,
Henn,M.R., Ogata,H. and Allen,M.J.
TITLE Draft Genome Sequence of Four Coccolithoviruses: Emiliania huxleyi
Virus EhV-88, EhV-201, EhV-207, and EhV-208
JOURNAL J. Virol. 86 (5), 2896-2897 (2012)
PUBMED 22328700
REFERENCE 2 (bases 1 to 411003)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Emiliania huxleyi virus 208
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 411003)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (18-DEC-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: triple-plaque-purified
Template preparation method :: CsCl-gradient
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: not applicable
Phage/virus taxonomy :: Coccolithoviridae
Phage/virus strain :: Strain 208
Morphology :: Icosahedral
Latitude :: 50.25N
Longitude :: 4.22W
Depth (m) :: 5.00
Collection date :: 27-Jul-2007
Sample collection site :: English Channel
Other collection site info :: L4
Filter fraction (um) :: 0.45
Volume filtered (L) :: 1.0
Habitat description :: Collected from natural E.
huxleyi bloom
Other metadata available :: http://www.westernchannelobserv
atory.org.uk/data.php
References :: PMID: 17359269; PMID: 16099989;
PMID: 12209309; PMID: 16553948
Lab Host :: Emiliania huxleyi 1516
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 17 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 85876: contig of 85876 bp in length
* 85877 85976: gap of unknown length
* 85977 149210: contig of 63234 bp in length
* 149211 149310: gap of unknown length
* 149311 201385: contig of 52075 bp in length
* 201386 201485: gap of unknown length
* 201486 242792: contig of 41307 bp in length
* 242793 242892: gap of unknown length
* 242893 277533: contig of 34641 bp in length
* 277534 277633: gap of unknown length
* 277634 302386: contig of 24753 bp in length
* 302387 302486: gap of unknown length
* 302487 324914: contig of 22428 bp in length
* 324915 325014: gap of unknown length
* 325015 345587: contig of 20573 bp in length
* 345588 345687: gap of unknown length
* 345688 363458: contig of 17771 bp in length
* 363459 363558: gap of unknown length
* 363559 374887: contig of 11329 bp in length
* 374888 374987: gap of unknown length
* 374988 383661: contig of 8674 bp in length
* 383662 383761: gap of unknown length
* 383762 389006: contig of 5245 bp in length
* 389007 389106: gap of unknown length
* 389107 393990: contig of 4884 bp in length
* 393991 394090: gap of unknown length
* 394091 398901: contig of 4811 bp in length
* 398902 399001: gap of unknown length
* 399002 403688: contig of 4687 bp in length
* 403689 403788: gap of unknown length
* 403789 407683: contig of 3895 bp in length
* 407684 407783: gap of unknown length
* 407784 411003: contig of 3220 bp in length.
FEATURES Qualifiers
source /organism="Emiliania huxleyi virus 208"
/mol_type="genomic DNA"
/strain="208"
/isolation_source="English Channel"
/db_xref="taxon:181215"
/lab_host="Emiliania huxleyi 1516"
/lat_lon="50.25 N 4.22 W"
/collection_date="27-Jul-2007"
protein /locus_tag="ERVG_00281"
BEGIN
1 MKATALLYLL HFVTSDLLSV NITVPTEQSA SSCPPPSPPP GTPRTYEKVL DLRFNQAYED
61 QQSSDDAYDD NKPVGDNSFV NSTTGRSWAE CGHFSYEWWG VDLGSEVNVG FVRLQSRNDC
121 CPERLTQVEI YLGSTPNTYI GNALVKSDVN VLPSNVMLEV DIDAVGRYLY YRRPPDANEY
181 GTQTGLTVCK TYVFLASPSP PPCPPSTPPL LPPPPPSPPS SPPPSPPPPS PPPPSPPPPS
241 VSPSPPPPSA SPSPPPPSAS PSPPPPSASP SPPPPSASPS PPPPSASPSP PPPSASPSPP
301 PPSASPSPPP PSASPYPPPF SPGQMAPPVS PPPPPSLPPP SSPPPSASPS PPPPSASPSP
361 PPPSASPSPP PPSASPSPPP SASPSPPPPP SASPSPPPPP SASPSPPPPP ASPPPSKPSP
421 LPPPSPLPPP SPPSPPPPSP PSPPPPSSPP PSASPSPPSP SPPPPSPHPP SPLSPPSPPS
481 LPPPSPPSSP PPPPSPPPPS PPPPSPQPPL PPPPSPPPPS PPPPIPPLSP PSIPPSPPPP
541 PSPPPPFAPF GGLCEDLTAL NIASEPTIWC NVTATDVSKV FDYLFTFSAT EQTVLVASLY
601 DVDNTLLGEV TRDVVGGSFG ANIFATRLLD EEFNTYLLQP GDRIQFGFNS TIETPLNVTD
661 FRGRFVPPDA PAAPPSPPPP SPPSSPPPSS PLPSPPPSSP PSLPPRAPVA CSSLIGRSLT
721 SNCDNENPPT CNQFYQIRND DEIRLCEQFG PVCDKTSIIF CSPPASPPPS LPSPSPPVPF
781 PPRPVFPPFP PPLGPITIPT SNPVNVIADP GSSCDVACYD IGMQCERPLT PNFVFETEES
841 MQDIVSLAGF NCLGVEIAQA TIQTIEPIQT DFIIVSGFEN DYYNGLYAGD GEVWRQQDTV
901 DLRIELSENV ADQRTLAYEG NYTLIIDEDT FKYTYTKETD DGTIEMVKSD DGLSWELTGP
961 GLPELNIGVF PPIFDVSIEV DEVVNGISLV SYARGDATLA NLKPRMQVSK GKGTRRFELT
1021 MLDVDFGDQF ADAILLNGAD FVDDEVDALT TGGSKQYRAI IPSIGAFIIK VEVDRTWSED
1081 IPVDAPAWTL RYTKSSDVYV FTTPVALDFT VGDVTMLFSS EGEYKAARFG TALGIEMANQ
1141 YIIRPQYATF DVPRAVGAYW YYNLAGNRQV RVYGPSPFSL LSDGTESELN DIQITQLPFP
1201 PNTPPLAPPP PISPPSPPAN CCVDPGRFTQ DYGSRCTSAR YGNGNPSPKY CRGQDANGIP
1261 TPKFDWFATC CEWTGSECVD LVPDELCANP SFPPPSPFPP YGPPPSAPNL EDHNADAKAP
1321 FISNLTSVAD RTGTCKILPK QAMGMLSLNY CNQTYLSSER ALCPCKPSAP SAPPPSPPPH
1381 PPPPFAPFAG ICDEIAGIRV LTEPIVWCNV VAPYLSKAFG FLFRFSATEQ TGLIASLYDV
1441 NETLVGEVTR EVVEYGSFFG TNVFATRFLA EDFNTYLFQP GDRIQLGFNT TTFATLNVSD
1501 FRGRFIPPDT PSEPPSPPLP SPPPPSPPPP SPPPPSPPPP SPPPTPPPSS PPPLPSQPPP
1561 SPSQPPQTPP PSPPPSSPPP SLPPPPAFPS PPPILDFEYS GEIEFDIEYD KAKWPLYNFI
1621 VSKEYDGSSY TTVNPFSGIK GTTPYTVDLE YLTLSTATEN HIFEIGGGGL AEEESTNRFI
1681 NGYLTSGNTM NHDWYNNNLV GPENVNALSN GEFYCVMMRS NSSQRSTYLR SADLYGNWKD
1741 NERTAFESPV STKNTHEKYL HVGGSYIAGV RKYFTGSIRN FRVFNYTKED RTIPAQNVTV
1801 QNLPRRNDPF TISLDVNTSN SDGLGVNNLL GFGDFEMHMN SKTRSYTIGG NFSRIGYFGK
1861 TGHTYVVKVP IYSLMNTVIG FVLEKDSVNQ TILTVRLTNA GLQLNDGDIN WWTMTPSGSG
1921 HLVVTFEYQG LLVSQDNTFL INPISPIAFI GALGEFSSSG FIPSYITVEE KSRGSFWASE
1981 ENKGYIQIYR YECQYGVCNP LSDIGDDRYI VGVVVDDDNI ATPFINGYEY LIGFPVQNHV
2041 VYGTSKIRVG TSNLTVEADS PFGDNNYHSI EVSYIYPTLR LKVDGSVVAT AEGKMNLVYT
2101 SGLTDRLRLG GGTFMYIWGS GYIAKQQNMP AVPQKDEFVG AMKNIVLNND VPSPLPPSPP
2161 SPSPPPPSLS PSPPPSLPPP PPSPPPPSQP PPSPPPPSPP PPSPPPPSPP PPSPPPPSPP
2221 PPSPPPPSPP PPSPPPPSPP PPSPFPPSPP LSPPSPPPPF SPFSGICNDL IAISVASEPT
2281 IWCNVTATDV SKAFDLLFTF SGPKQTVLVA SLYNVDNTLF GEVTREVVEF GAFGANVFAT
2341 RILDEAFNTY LFQPGDRIQF GFNSTIETPL NVTAFRGRFV PPDAPSAPPS PPPPSPPSSP
2401 PPSSPPLPPP PSPPPPSPPP PSPPPPSPPP PSPPPPSPPP PSPPPPSPPP PSPPPPSPPP
2461 PPPSTSPSPP PQSTSPSPPP STSPSPPLPV CNTMCVGLSK DISDDIQYTN TCCDLDTLNG
2521 AAFSGVVGDI IPTGERFIDT YEIWNDAYES DTVLVVYSLN IPVYATVRTY TFTVDVTSVL
2581 NDGLELQLDA VPNATADTLD DFATLVESNN VFYDINSTDS IILDNAFIPS GISPIKSFSY
2641 DITSYIRYLN ELGHAGKYGG VRITPQYESN IQSRNANPTI GYALSNIEII VTEPDDQPGI
2701 STGALIGIII GTVAVFSILL TIAYLSYTKK ITNRPHIPSF SNTIPPTRQG TYFI
//