LOCUS       AEP16073.1              2363 aa    PRT              HTG 22-FEB-2012
DEFINITION  Emiliania huxleyi virus 208 hypothetical protein protein.
ACCESSION   JF974318-195
PROTEIN_ID  AEP16073.1
SOURCE      Emiliania huxleyi virus 208
  ORGANISM  Emiliania huxleyi virus 208
            Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae;
            Coccolithovirus; unclassified Coccolithovirus.
REFERENCE   1  (bases 1 to 411003)
  AUTHORS   Nissimov,J.I., Worthy,C.A., Rooks,P., Napier,J.A., Kimmance,S.A.,
            Henn,M.R., Ogata,H. and Allen,M.J.
  TITLE     Draft Genome Sequence of Four Coccolithoviruses: Emiliania huxleyi
            Virus EhV-88, EhV-201, EhV-207, and EhV-208
  JOURNAL   J. Virol. 86 (5), 2896-2897 (2012)
   PUBMED   22328700
REFERENCE   2  (bases 1 to 411003)
  AUTHORS   Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
            Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
            Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
            Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
            Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
            Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
            Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     The Genome Sequence of Emiliania huxleyi virus 208
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 411003)
  AUTHORS   Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
            Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
            Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
            Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
            Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
            Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
            Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (18-DEC-2010) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     This genome was sequenced by the Broad Institute and co-owned with
            CAMERA.
            
            ##Metadata-START##
            Isolation method                 :: triple-plaque-purified
            Template preparation method      :: CsCl-gradient
            Phage/virus type                 :: DNA:ds Viral DNA
            Phage/virus "hybrid" information :: not applicable
            Phage/virus taxonomy             :: Coccolithoviridae
            Phage/virus strain               :: Strain 208
            Morphology                       :: Icosahedral
            Latitude                         :: 50.25N
            Longitude                        :: 4.22W
            Depth (m)                        :: 5.00
            Collection date                  :: 27-Jul-2007
            Sample collection site           :: English Channel
            Other collection site info       :: L4
            Filter fraction (um)             :: 0.45
            Volume filtered (L)              :: 1.0
            Habitat description              :: Collected from natural E.
                                                huxleyi bloom
            Other metadata available         :: http://www.westernchannelobserv
                                                atory.org.uk/data.php
            References                       :: PMID: 17359269; PMID: 16099989;
                                                PMID: 12209309; PMID: 16553948
            Lab Host                         :: Emiliania huxleyi 1516
            ##Metadata-END##
            * NOTE: This is a 'working draft' sequence. It currently
            * consists of 17 contigs. The true order of the pieces
            * is not known and their order in this sequence record is
            * arbitrary. Gaps between the contigs are represented as
            * runs of N, but the exact sizes of the gaps are unknown.
            * This record will be updated with the finished sequence
            * as soon as it is available and the accession number will
            * be preserved.
            *        1    85876: contig of 85876 bp in length
            *    85877    85976: gap of unknown length
            *    85977   149210: contig of 63234 bp in length
            *   149211   149310: gap of unknown length
            *   149311   201385: contig of 52075 bp in length
            *   201386   201485: gap of unknown length
            *   201486   242792: contig of 41307 bp in length
            *   242793   242892: gap of unknown length
            *   242893   277533: contig of 34641 bp in length
            *   277534   277633: gap of unknown length
            *   277634   302386: contig of 24753 bp in length
            *   302387   302486: gap of unknown length
            *   302487   324914: contig of 22428 bp in length
            *   324915   325014: gap of unknown length
            *   325015   345587: contig of 20573 bp in length
            *   345588   345687: gap of unknown length
            *   345688   363458: contig of 17771 bp in length
            *   363459   363558: gap of unknown length
            *   363559   374887: contig of 11329 bp in length
            *   374888   374987: gap of unknown length
            *   374988   383661: contig of 8674 bp in length
            *   383662   383761: gap of unknown length
            *   383762   389006: contig of 5245 bp in length
            *   389007   389106: gap of unknown length
            *   389107   393990: contig of 4884 bp in length
            *   393991   394090: gap of unknown length
            *   394091   398901: contig of 4811 bp in length
            *   398902   399001: gap of unknown length
            *   399002   403688: contig of 4687 bp in length
            *   403689   403788: gap of unknown length
            *   403789   407683: contig of 3895 bp in length
            *   407684   407783: gap of unknown length
            *   407784   411003: contig of 3220 bp in length.
FEATURES             Qualifiers
     source          /organism="Emiliania huxleyi virus 208"
                     /mol_type="genomic DNA"
                     /strain="208"
                     /isolation_source="English Channel"
                     /db_xref="taxon:181215"
                     /lab_host="Emiliania huxleyi 1516"
                     /lat_lon="50.25 N 4.22 W"
                     /collection_date="27-Jul-2007"
     protein         /locus_tag="ERVG_00197"
BEGIN
        1 MPFNVVASEQ SYQTVFLEGW TKCQPPSAPP PSPPPPSPPP PSPPPPSPPP PSPPPPSPPP
       61 PSPPPPSPPP VPPPPSPPPP SPPPYPPPPS PPPPSPPPSP PPPSPPPPSP PPPSPPPPSP
      121 PPPSPPPPSP PPLPPPPSPP PPSPPPPSPP PSPPPSMPPT PPFCNNTGVG VFDGTENSVI
      181 GLGARPGYIG ALGPVTYTFS PTRTIQETGG VLYIGQYNDS PSNDVIQIGF KNNKLRYVLS
      241 SDFDTVVTGT FAEWTIPTIN ENQRIVIVHK NDGAGGTVVT LRIGGGINSE TNQPVVGTTI
      301 SPDQSLNYFP PEVYRPEILA GEVRYGTGDP PGNYYFIGEL TALYVANGDI DDLAGGESSL
      361 YRYISTYADD DGFGSNIIVH SFTSTCGPSP PPSPPTPPSP PPSPPPPSPP PPSPPPPSPP
      421 PPSPPPPSPP PPSPPPPSPP PSPPPSPPPP SPPPPSPPPP SPPPPSPPPS PPPPSPPPVP
      481 PPPSPPPPSP PPPSPPPPSP PPPSPPPPSP PPPSPPPPSP PPPSPPPPST PPPSFSPYPP
      541 PPTPPPPGPP PPEPPPPSPP PPSPPPPSPP PSQPPPPAAP PLAPIVPARC KSANMLLNTF
      601 PDIDASFTGA SMVYPAGDLV VEYDNSGDQK TPSANAVMLL DRTYSPVATS TGSVVARIQT
      661 KQYLSTTLAA SRNDPASVAI ILRTLHAWED RVAIRVAVQV KDKYGSPATT GSYALELTLT
      721 DPGNSLSQTY TNACAERQGN NGNRFATYCS VTSSPGSTWF LLAASATVSV ALRVNGVLVD
      781 TATSGDTLSF VTSPAWYNPL YRSDFSSNFR SSPPGYSPSI DKLFATMPIS PMYASEPFDV
      841 FIYASSQSFS IAAWRVQLYY DTTQFDVENQ AVSDKFQAPA VTIDGTGITL AVAGLLCGTG
      901 CTTTQLNDVT GDVIYLAKIT LKSKAGVPVG SIDTGAYPYA YEMVNYGGGI VQDKTTGVMF
      961 DYRGSKRSTG FVEIQEVVPR GIFAFPPPSN KPRGELLNSA LLDGNDAVYT MVVNEYNSND
     1021 EANEGSNVVS TATSPSCSFP VGINNNVIDS VTNCVVRMTT TETDSQGGVT LGVQVISSGA
     1081 TMTRNIGFDV YAPQSIVILA SDTNNILERI TVGTTPLDAS GCTSDETVYQ PTTLHAIVDG
     1141 VDLTNEVSFF IDDTNVIRFA SGTGDRQDVV QGVTPGSTTI RLYSGAPDSI SLSVSDTQVT
     1201 ATVTARVVTS MSWVTKPPST YNYPGSFSAS VRYENAMNSE GDSGLIFTTL EWSDGSRSDV
     1261 GYASSLGSLA FTSQISSSIE VDAPGVNGNS DDFTRVTVAQ GASPMCTEQG IETRVSWCDT
     1321 EIVTPDYVPI FLDLPYPISV ELTVDASKLT SIVNDARLSP ISVATTSGMT LVVTFQDTTT
     1381 GELSYRTMTA DNRVVYTAVS SCASVDNDAN TVTINDDSCV GVTATVSATI TLDGRPLTDT
     1441 ASVNVVGVDN SQTSLTFLKY PSGGAASSTI GLIECTSDYH SVRTRLRVRL TDGTLINVDN
     1501 QASYSSGTPG VASVSDRRVL GISAGTSVIT GTFGSSTSGS SPITVVDSVV NPVNIVEWSV
     1561 PTSGTTLSGV VNSTFGTSVT LRFQDGLVFS LGSSENAGVP AVSTLIEFES DGEYSIAVID
     1621 DDGTIELRKN SITDVSMFAR LTCNAGKFDG KFTQGNLMAD TLDVDLGSQS GLQFEPTQTG
     1681 EIIQIDVYAN PGNAYLRSIS LVIETTDIGV IDPATAVWID PATPQFPVTV NTQIPGEPNR
     1741 IAVLSGASAP SGSSNKGKVF LGTIQIIAVG SGASVVFGEI QSMETVSTLG CDITQDPKPA
     1801 CYAVAVEQPV VAGLGIVTVD AVSGFGANLY DELVSDVTYS FDYRRMSECD PCNGVGQVPG
     1861 DVNGDCKLLS SDASALQAFI GARQTFENTG IGTDPLETYT ANGQSCQWLR EQLNPNRDKF
     1921 TAQDGYVNNA IGKPKIDTSD VVSLIRTEVG FYRFLTGVTI ECTSSGGVDV TLDLSEPDGT
     1981 GGARPADGNF VDVKFEMRID PTRTVIAATA GSIIASDPSF PSSFPDYPDG GTGSQTPLVV
     2041 QAAAIGNGKF RAAISMDYQP EATEFYVAFL IETKNAQLIK TIPTSYQSLL GSDLQPYSDS
     2101 GISFNPSIGS YQSLVRDTAF VCNGITPPPS PPPPSPPPPA PPPPSPPPPS PPPLPPPPLP
     2161 PPPSPPPPSP PPPSPPPPVP PLCFDQELLF IDNSPREDIA FSENIGGGSA ITIAGWIEVG
     2221 DISPDDGYIF QTSQSGTDLI AVQVSGGTGT TRSVRYRSEP VGGALVDVQT SNVITTNVFT
     2281 HVAVVVQNVE SPNNDIAIYV NGQSVFEISS PEVRIFPRDV SRNIREIGGN YIGRMRDVVG
     2341 LNRALTADEV ALLMIRELDV VYK
//