LOCUS AEP16011.1 1990 aa PRT HTG 22-FEB-2012
DEFINITION Emiliania huxleyi virus 208 hypothetical protein protein.
ACCESSION JF974318-133
PROTEIN_ID AEP16011.1
SOURCE Emiliania huxleyi virus 208
ORGANISM Emiliania huxleyi virus 208
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota;
Megaviricetes; Algavirales; Phycodnaviridae; Coccolithovirus.
REFERENCE 1 (bases 1 to 411003)
AUTHORS Nissimov,J.I., Worthy,C.A., Rooks,P., Napier,J.A., Kimmance,S.A.,
Henn,M.R., Ogata,H. and Allen,M.J.
TITLE Draft Genome Sequence of Four Coccolithoviruses: Emiliania huxleyi
Virus EhV-88, EhV-201, EhV-207, and EhV-208
JOURNAL J. Virol. 86 (5), 2896-2897 (2012)
PUBMED 22328700
REFERENCE 2 (bases 1 to 411003)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Emiliania huxleyi virus 208
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 411003)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (18-DEC-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: triple-plaque-purified
Template preparation method :: CsCl-gradient
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: not applicable
Phage/virus taxonomy :: Coccolithoviridae
Phage/virus strain :: Strain 208
Morphology :: Icosahedral
Latitude :: 50.25N
Longitude :: 4.22W
Depth (m) :: 5.00
Collection date :: 27-Jul-2007
Sample collection site :: English Channel
Other collection site info :: L4
Filter fraction (um) :: 0.45
Volume filtered (L) :: 1.0
Habitat description :: Collected from natural E.
huxleyi bloom
Other metadata available :: http://www.westernchannelobserv
atory.org.uk/data.php
References :: PMID: 17359269; PMID: 16099989;
PMID: 12209309; PMID: 16553948
Lab Host :: Emiliania huxleyi 1516
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 17 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 85876: contig of 85876 bp in length
* 85877 85976: gap of unknown length
* 85977 149210: contig of 63234 bp in length
* 149211 149310: gap of unknown length
* 149311 201385: contig of 52075 bp in length
* 201386 201485: gap of unknown length
* 201486 242792: contig of 41307 bp in length
* 242793 242892: gap of unknown length
* 242893 277533: contig of 34641 bp in length
* 277534 277633: gap of unknown length
* 277634 302386: contig of 24753 bp in length
* 302387 302486: gap of unknown length
* 302487 324914: contig of 22428 bp in length
* 324915 325014: gap of unknown length
* 325015 345587: contig of 20573 bp in length
* 345588 345687: gap of unknown length
* 345688 363458: contig of 17771 bp in length
* 363459 363558: gap of unknown length
* 363559 374887: contig of 11329 bp in length
* 374888 374987: gap of unknown length
* 374988 383661: contig of 8674 bp in length
* 383662 383761: gap of unknown length
* 383762 389006: contig of 5245 bp in length
* 389007 389106: gap of unknown length
* 389107 393990: contig of 4884 bp in length
* 393991 394090: gap of unknown length
* 394091 398901: contig of 4811 bp in length
* 398902 399001: gap of unknown length
* 399002 403688: contig of 4687 bp in length
* 403689 403788: gap of unknown length
* 403789 407683: contig of 3895 bp in length
* 407684 407783: gap of unknown length
* 407784 411003: contig of 3220 bp in length.
FEATURES Qualifiers
source /organism="Emiliania huxleyi virus 208"
/mol_type="genomic DNA"
/strain="208"
/isolation_source="English Channel"
/db_xref="taxon:181215"
/lab_host="Emiliania huxleyi 1516"
/lat_lon="50.25 N 4.22 W"
/collection_date="27-Jul-2007"
protein /locus_tag="ERVG_00134"
BEGIN
1 MLSFIALLFI AVVNADVILV QQSNRQAFNG YVTSRNPGGN PTDGLLCDVT PNGYIEMKNT
61 CGQNFWGFAI NSDAYKLSIK LRNVGTSQQF QYWLYGIGGA FAGRETFVAT TDTSAGTYYY
121 YIPLTAQIVF PNELVIQIND GDNANGHEIQ LMTAETCRDD NTALSIVGGP STCSSLASNQ
181 CDSSNVYGMH CPVRCGVCSK PPSPPPPPPS PFPPSPPPLP PSPPPPVGIG SPLIRYEFAK
241 TKLGTDVSEG TQYFDGNLLN DGQTGYISSA AGGTLQYKLT GVTDGKTLEF GNTGYLQYIS
301 NSGNNINLLR TVDFTFWLYL KISSSLTSDC TLVEVDDQYR FGLQYSSGVY YVTLASSGSN
361 PATTVVTDTP LSPGVWYDIT FTNTATTTDN VIADAIQMFI DGSFTATHDV TPTVIGSGTF
421 RIGGGSVGIF KGVIDKLGYW DGTLSVANIQ SLTTPKVAPS PPPPLPPPPP PSPPPPSSPN
481 PSPPPRPPPL PPPPPPPSPP PPSTPPPPLP DGGWADNTVN IFPRDANSWP PTTITTECGI
541 YKVLGGYEKI GPSAPHRTIG RTFNGLTENH ISLLIQFDFL KIDTWAATAP AILTIDSTEV
601 WRKIYADESG TDQCGGAGVE VYETIVLNVP HTATITSFNF ATGEIGNDGY WGIQNLVITP
661 LYESPSPPPP PSPPPSPPPS PPPSPPPPPS PPPPSLPPSP PPPYPPLESG VLSISGCDAA
721 SVLCRPASFD TFSVRCCQFG GAGGISICPN TSPDLEDRLG FSGQEDATLY QVQQACIDAG
781 YRLCTATELS VGLTLGGACE SPGCTYDNTR FIFASSTACS PPSPPPPSPP PPPPPNSPPP
841 PSSPPPPPSP LTGELLSDGK KRTWQDAKEF CESYPGGSLP SLFNIQGQIA MQSSLSNTGE
901 TGAWLAGTRV TTGTWKWVPE EDIFWQNGEI VDGKFANWEE GAPYAGSPPC LLFQNTGFWT
961 NAVSCTQAQI TICEGISEYL SPPPPSPPPP PPSPPPGAPP PSAPPLPAPS PTVECGPYKI
1021 RQGTAPIPGA LFGALDNLNG GMTTCFYAEN PTNQYIEVLD IPSETPGGDS IYNIVVERER
1081 LVVTIQSIKD ASRIQEFSIN FESRRHICIL HQEGAGGQVT AYRDGTSAGT VFNVDFVQRA
1141 PLHAPVNVGS PKGLDWPEGE YAYLENVNIY RKLLTNTQRN EDANNGLATS GSPTYILHAL
1201 YTCSPPPPPP PSPPPSPPPP SPPPSPPPPV PPPPSPPPPS PPPPSSPPPS SPPGAPPPSP
1261 PPPIPLPDGS FDMTSSSDFP GSEFLWSSNT PLSTTLCKKY IVLGGYNVFG ANAYIERYYQ
1321 NFQVHSHLYI QFDFLKIDQW TSGDDAIVTV DGEVVWRQVF NGGNGDQLCG LPGDQALEEF
1381 VTIQVIVPHT ANDARVRFTT RLGVQANEAS WGVNHIIVIS QFPSPSPPPS PPPSPPPLPP
1441 PSPSPPPPPP PLSPPPSPPP PSPPPLPSFP PLCNEGGVQS IGFSGLGDDL FGMTGLENIG
1501 SNIDRGVTYS FEVRRFEIDN NEAFIFLGGN PYNPFQRVVF SFQNELTYSP MKGIAIPLGV
1561 PRIDVEDYVK VIVQHFAGSG LIYTSIDNSP FEVAEGSTET MPADVYRPSL LLGSGDPTEF
1621 NSLYVGRMRN IYVYNSIVDI ADITGGNRPV LKAFTGGCYP PAAPPPPSEP PLPPSPPSPP
1681 PPSPPPPASP PLLPPAPPSP PPPPDPAPPP PPGPGLDVSQ FSAVIPIVIA VVVLLLGCCT
1741 VYLRRRYGYN FGWLLTLVNL FKGDVANIAA APADQRGRVA AEAGQRQATD AAGRNGLDPG
1801 LASGAAGLFT GGMGAPSAPS APSPRQSAAA ASTPRPSVMS AIFGGGAPAG NNTRPTYVRP
1861 TAASEPTGQT GGSMFGGILP SAPSANTVRT GRGTSGRASR TARVAPTGQS SGNGNPFADF
1921 INTGPSTSGP RSNMRNTGPS TSGPRSNMRN TGPSTSGPMS QFMNIGNAAW GAPNAPAQNT
1981 SGRNARTNRR
//