LOCUS AEO98071.1 5427 aa PRT HTG 28-NOV-2011
DEFINITION Emiliania huxleyi virus 203 hypothetical protein protein.
ACCESSION JF974291-61
PROTEIN_ID AEO98071.1
SOURCE Emiliania huxleyi virus 203
ORGANISM Emiliania huxleyi virus 203
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota;
Megaviricetes; Algavirales; Phycodnaviridae; Coccolithovirus.
REFERENCE 1 (bases 1 to 400520)
AUTHORS Nissimov,J.I., Worthy,C.A., Rooks,P., Napier,J.A., Kimmance,S.A.,
Henn,M.R., Ogata,H. and Allen,M.J.
TITLE Draft Genome Sequence of the Coccolithovirus Emiliania huxleyi
Virus 203
JOURNAL J. Virol. 85 (24), 13468-13469 (2011)
PUBMED 22106382
REFERENCE 2 (bases 1 to 400520)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE The Genome Sequence of Emiliania huxleyi virus 203
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 400520)
AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C.,
Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C.,
Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E.,
Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S.,
Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L.,
Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T.,
Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B.,
Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2010) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT This genome was sequenced by the Broad Institute and co-owned with
CAMERA.
##Metadata-START##
Isolation method :: triple-plaque-purified
Template preparation method :: CsCl-gradient
Phage/virus type :: DNA:ds Viral DNA
Phage/virus "hybrid" information :: not applicable
Phage/virus taxonomy :: Coccolithoviridae
Phage/virus strain :: Strain 203
Morphology :: Icosahedral
Latitude :: 50.006N
Longitude :: 4.3145W
Depth (m) :: 15.00
Collection date :: 27-Jul-2003
Sample collection site :: English Channel
Filter fraction (um) :: 0.45
Volume filtered (L) :: 1.0
Habitat description :: Collected from natural E.
huxleyi bloom
Other metadata available :: http://www.westernchannelobserv
atory.org.uk/data.php
References :: PMID: 17359269; PMID: 16099989;
PMID: 12209309; PMID: 16553948
Lab Host :: Emiliania huxleyi 1516
##Metadata-END##
* NOTE: This is a 'working draft' sequence. It currently
* consists of 7 contigs. The true order of the pieces
* is not known and their order in this sequence record is
* arbitrary. Gaps between the contigs are represented as
* runs of N, but the exact sizes of the gaps are unknown.
* This record will be updated with the finished sequence
* as soon as it is available and the accession number will
* be preserved.
* 1 20862: contig of 20862 bp in length
* 20863 20962: gap of unknown length
* 20963 45640: contig of 24678 bp in length
* 45641 45740: gap of unknown length
* 45741 78538: contig of 32798 bp in length
* 78539 78638: gap of unknown length
* 78639 123169: contig of 44531 bp in length
* 123170 123269: gap of unknown length
* 123270 178489: contig of 55220 bp in length
* 178490 178589: gap of unknown length
* 178590 257650: contig of 79061 bp in length
* 257651 257750: gap of unknown length
* 257751 400520: contig of 142770 bp in length.
FEATURES Qualifiers
source /organism="Emiliania huxleyi virus 203"
/mol_type="genomic DNA"
/strain="203"
/isolation_source="English Channel"
/db_xref="taxon:181212"
/lab_host="Emiliania huxleyi 1516"
/lat_lon="50.006 N 4.3145 W"
/collection_date="27-Jul-2003"
protein /locus_tag="ELVG_00396"
BEGIN
1 MILQKSRKLV DQLINDPLGE MLLIRKSDCN FLKCKNKQVM ITILILLLHC AYVSAQWYWM
61 TGNALPGRTI TASTNGFSDF KENAIDGNII SRYSSRDGRP EPSPFWSVTF DQYILMRYII
121 VFLRGPISGE PDYFYSQRMN GVTVKITDDS AVPGGTFEYS VLNDCLDSAL EPQCNELPCS
181 YCEANNKNNI YDNGEKSRTW GWQGLGNGRV ARTITITSPN GVSTQPMSFQ ELYIWGVVSD
241 FPSPPPPPPP PPLPPPPPPP SPPPPPPPSP PPPPPPPPPP PPSPPPPPPP PLPTPTGRSC
301 FSYAIGPYTR GNDVTPVGEN ILEKTIFVPS DTIIVMYTQA VRQNSLRTDI ALYVNNVDTH
361 RSMATTATLG WQTATVLWSA IYPKGYYEFR IVGVGSIEWG IGEYAQMTLM TFPLSIPGIA
421 LYTADSPNLC PGMGATTRDI ASTTVTLTET SVLAMFAQSI TPETNGIYEL YVDSTLIAKS
481 NWAWHSPDYV GGRYWNAVSI VQYKQYNAGT YTVKVAIRDA SGVGDFGCNG RWQRVLNVVV
541 LPIGTSGLNL QTKAEDFQGS IALLPNENIL SYTVNVPVES TLLVAGSVLG DPGGAGSGNQ
601 LRYDYQLASN NPDCLSKTSI YNIRPEALRS GQVFSVCDAV GSTQFDLRPV FNGYSGTPVK
661 ESTYINTLVI PATYCDVPVA DVLPCNQLRV GDYPGNDVGN VGGVPSPSAC AAYCRNTLDA
721 AYFGYNIDDN HCYCKDARTS ENTNAGFVSG RTCYGESFAY YYTFPLDEHE WEVVGTSATA
781 PIMTRCGGHT ILGGFDAFGT GVTLSKKLID ITDHSGMIIK FDFMQIDSWD SEDAILTVDG
841 VEVWRQTFTQ GSSNICGFGW NDQYYPNIQV KFSHSRTTAD IIFSTTLDGA ADNEAWGIQN
901 IQIILTFDPV YPSGLPSSPN HWFRNDNADL NTIQWALVNP NTKYCNGFYA GTDRSFSECR
961 DVCANDPTCT HFARNGDFNE IGFCALYAAK TCEQSTDGDT TVIAFTKVFV WPDYVGELPG
1021 ATIQGILPTN IYVDGTNGAN SKFTAVGGSV DTAIRFGGII GADFTICSLT RYGTGTRSTI
1081 LRGETGNWLH GHHQGNVGKM YYENWITPSI GFQPSYLSQD DWIVSCGTSG VNPVYTECTN
1141 TRSGGKFGQT TSKISVNFNP FDSDSDFEVA EILTWPRVLS EGEMIDASTY LAGTVMGKYF
1201 SCNPPSPPPS PPPPYPPPPS PPPPSPPPPS LPPPSTPPPP PLPLTPGGWK GQYVSIFPPD
1261 ETLWTGTDEV TKCGPYVILG GYNVLGVGDT LSRTYTSMPH HVELLIQFDF MKIDSWDNED
1321 AILTVDGVEV WRKTYDGSGT ELCGNGNRAE IYDAGIRVQF THTSDTAALV FSTTLSSAAS
1381 DESWGIQNVV VNLLTDEYNT CDQWCKLEGL CTNDYHYIMV LGVRKYVYCI FDDNSRGIDV
1441 MDTTGLTTKN NLHPNSCPEG MNIWVPRSNS FVQTLETSLS FRPKTVGIYG IANGCGGCSS
1501 NAMNSDNAAQ AAHWKAVSPI RTPWFMRAVP YQEPNGDYTA GDWLHISTTV SDFDADGYYF
1561 NDRTDGYPES RYYCSTNSYE LDYPANLPTG ANAWYKQGTM NVDSPTWKLL HTDGFCSSGY
1621 YAGDAEYTGL TLEGCAEICA SEPQCGFFYW RDSGITCSRY DTRTCPFAAA PVGNTGSAYA
1681 KKYMWADATG NGNTAMIGGS DASVVDTLTL TPGENGAWLP MTVLRGTTTT TVDFGPVIVT
1741 DFTICSLTRY IGGSNKRILD GAGVNWLHGH HGGNLGKAYY GAWKTYSGSI TESKTEWLVM
1801 CGSNGVTEMY ANCEPRRTED GGTSPTSLTI NNGVYANTQP SDFEVSEIIT WPRELSETEM
1861 KAAVDYMLHE VLGQSTCTVT CEDMLTYRSL VPECTSTGGD ALDQPTCDAS YQRTGSGPTE
1921 VTDSFQVCQY VNVACTVADT IEDCKIPPFC QTFSLRIEPQ ANSYRIRIDL TNYGAGEYIV
1981 SADFYFSDDF DGDAWIAHST WYDTSSPDST KLEGRTASTP SSQWRSITAP KTVSFNPSHM
2041 YWFLGFPVQS TTGYVWVTNV QVTAPNGDLL IPDGTFPNGE DLGQYDPPGD PSEFHSIVPS
2101 CANAPTPPAV APPPLPPLPP RNGIFEFTCN FNTGDYVNNC PGVNLVTNVE KDLRYVNLAV
2161 TEDTTGYITY TLPDFPEITE IIVRATTFIS SVNNAGQSLM ISVAQTENQG LSQTNNNMAS
2221 QFLTRPSSGY DYAFRHYLRS NPGFRSRRHN RTNIKYSDLF DKFVEFYSRF VYTDTVLRGY
2281 INYGNFQEAV SNADESRGIL PMPKEDKQIL TISAESTGDT YLIRDFTIQV FYSEKSPPPP
2341 PPIPPPVPPR PPLTGNLPGK NIYARYQMGG FSLTPDNDIL SMNFELLGEY CCRADTYTLV
2401 TIGTTDKTTC ESTCRTDETC DAYAISGCSN ANDQDCTGTC YNYREMTGTK YTDFCSDDSL
2461 NGNAWCYIRS APSFGMWPDV SGNDFHATIS SPGAYAVTAD GNGATNQVTA LGGSTTTKVN
2521 FGSIIPSTFT ICSVTRYTNI NSRERILDGK GANWLHGHGD KLRGVAFYGE WKTPTTSISG
2581 PLYDWLVMCS SNGDVEIYAN CEDRRTNNGG TSPTELTIND GAFSVDSSDF EIVELVVWNR
2641 ILSDGEHLQA TAYLYNDILG VGTCTSPPPT PPPLPPLSIG NGIASYGCDF RNGKEDHFYY
2701 SCSPDNGFIP RSQLNSPSQS KIAESHIKLV QDSAPGTTGG VRVATQMSSR FSAIKSIVIR
2761 ASFFISRDTG ADQVGFLTHS NDANRNTDIC NNPNDNDINA ACINTYFSGS ATQSQLETNA
2821 VGTVKLVDFD DNPYLNQGTF KTLELIYDGT DVTGSWAHPD GPPIATSTPG TIPVNTLDYV
2881 TFGAWTGGTR NTFSIEWFTI QVEGEPIYNT CTDWCVIGNQ CSDGIQFINV NGKSIQVRCT
2941 YDGLIGVDTI WIQDGISTNR YDEPNSCPSG MDIWVPRSNP FVQSIVPYYY NQKLYQTESF
3001 SSDQTWLNRF VPTVQECYNE IISRPTCHQS YFNWAARGDG NCGCINIASN PLDNIATAYE
3061 IDIYKIVDIT SASGDIGVLF GMYGIADGCG TCSTSAMNSD SADKVAHWSA VSNPGIPWFV
3121 RATPYIEPNG DYIEGSWLSG KFLDADGLQF NDNGAGYAFT SYICSTNYWP PSPPSPPALP
3181 SSENCLNQQT DCTASPPECA VDTTYFRLAS CRTVTWTCSI TYGYVNGLSY LSSADENPTR
3241 NQYDYTRIFI GETMVSETRN DVSSSPRIIF DNVENPVVEI IAVSGVPVAE QHMLVSSVCL
3301 FQTTSPSPPP PPPPSPPPPC HQVWFDTNLP GGDLPGYPVT EVTYSSCAHR CELEPALFFT
3361 FKKSDKSCWC KDSYTEQQTD VDYVSGQSCL KPPSPPPPSP PPPLPPLSPL LSGTLVIDGC
3421 NMNNVRCEPA SFNTGSIRCC RDSGIPLGIS VCLGAGSGGS EFLPPIGLGV TGSKDASLYT
3481 TSLVCTTLGY RLCTILELST PNGGACSSGC GYNTQSEHTM ISSDPCSPPS PPPPSPPPSP
3541 PPSPPPPSPP PLLPIIPNRC RASNMLAHTI PQIDAPFSGS SILYPSSPME STFVETDEQK
3601 TPRANASVSL DRKYAVSNAG GTVIARVQTK TFATMTVTSN KHPPVRHDTI VRTPMAWVDR
3661 IRIRVAVQTK DQYGSPETLG PFSVSMRIDD SSNGLTGSGT CASQIGWSGN KYTMYCSMTT
3721 SPPGNWFPLG GVADVTTELT VGGSLVNTVV DTDAVQFITP PVWYNLVYRS DGEQNNRPSP
3781 TGYDPVTDKM FATLQVSPIY GDETFDVFIY TSTLTFPVNA WRIELRYDTT KLDYVSYSSS
3841 GKFQAPLVDP AASGVTIFSA GLLCGTGCNA GQLDEVTGDV IYLAKVTLRP KSGQPIGGIN
3901 TGMYPYASEI INYGGGDIHR STTGKMFDTR EGLQTTGQIT IQDIVPVGIF SYPPTITKPI
3961 GELFNSAHLY GTTAEYQLAV YQFNSDDRHN NGNNVISIGV SPSCSYSSGA NPSIIDSITN
4021 CNIVMTDSQT SSANDFGVIV QVISESITMT RTVLFDVYSP QTITITADDT TLNRLLDING
4081 ATFEPGPEPC VSVYQTAKLR VDVDGVDYTT QVSFVPDDTN VIRMLSGLDA TNIMRGIQPG
4141 TTALRLYTGA ANSISMTVSD AGVRAVAVNA RIVTDVSFIS STQPPELSPS YEYPGEVYST
4201 VSYQNEMNSE GDFGYIFTTV EWDDGHRTDA GFLDELGTLT YTRQVDSIEI DESGEYPMVT
4261 VAVNAVQMCI DQGIEVSYNW CGTTMITPQY IPIFIDLPIP VSLTLDIVQS RLTSEINDAR
4321 LSPINIPTSS SMILTVTFMD TTTGELTYRE LTDDTRVTYT PISSCASVDV NNDVQIVNND
4381 CVGSNAEISA TITIDGNGIT GSGVVSVVGI DNAQSNVEFT KYPSGGVAAS TIGKIECTNY
4441 YHSINARLTI MLTDNAVYYI TTQATYSSNN AGVASVSGRR VLGIADGIAS ITANFGSSTS
4501 ASATVTVSNS VTNSVSSITW NIPSLSGSTL SGIVDSSHPA AMVVTFVDGL IFNMPSGVPG
4561 IPDIDEMMSF ESDTTFAVTT DSSGTLQLHA NSVANVIVTS TLTCRPAVTD SNTIQANLKA
4621 DSLDVDLGQQ SGLQFVPISN GQTVDIHVYA NPGSDHYLRS ISMYIDVSDE TIIDPSSAIW
4681 TDPPSPQFPV TVSTNIPNED KRLMQLSGAA APTAFSNLGE VFLGTLRVTS ISNGDTFVTG
4741 QILSMQAVRT LNCNIGAAEP PTCLTSTTDP QIVAGSGVIR VGASTTLTNT QYNTLSSSIV
4801 YASRRLSECD PCGNEADRVA GDVNADCKLL SSDASALQAF ILARQDFENT GIGDDPLESY
4861 APNGQNCDWL KQQLNPDLNK FTEEDGYDGN AIGKPKIDAL DVISLIRTEV GFYRYMVYRS
4921 GLSAIDEEIK STCTNPTGHF NLTINSLKQS DGIGGMVDAD PDYVDVIVEL RIEPSRNSVF
4981 AIVGTIIEDS ENFPPSFPPY PYGTEDQTPL VVSAASLGNG AFGITISVEY SAIETSFYAA
5041 VLVETKNAQF EKTNPTSYQS HLGSSLKPYS DSGIEFNPLI GSYQSIRLNA SQTCIPDTPL
5101 PPPPSPPPPS PPPPPSPPPS PPPPSPPPSP PPPSPPPYPP CHEFDDETRI VGYDVPGSSI
5161 IVASSAYDCS IQCENEHGSV SGYFTHHKTD GDCECKTWPP PEAFELNVNY ISGQTCIKPP
5221 SPPPPSPPPP SPPPSPPPPS PPPSPPPSPP PPSPPPPSPP PPSPPPPSPP PSPPPPSPPP
5281 PSPPPPSPTP PSPPPPSPPP PSPPPPSPPP PSPPPPSPPA PSPPPPSPLP PPSPPPPSPP
5341 DRTSTSGTKA TIGSVAGGMS GIIILATIFA YRKIRSKKYR DFGSTADHME QGTYRITTKR
5401 GGRGKMRDDS LPIAHQPSRF LSRGRFH
//