LOCUS AEE90172.1 377 aa PRT HTG 12-MAR-2012
DEFINITION Anguilla anguilla homeobox B2a protein.
ACCESSION JF891394-10
PROTEIN_ID AEE90172.1
SOURCE Anguilla anguilla (European eel)
ORGANISM Anguilla anguilla
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Anguilliformes;
Anguillidae; Anguilla.
REFERENCE 1 (bases 1 to 230324)
AUTHORS Henkel,C.V., Burgerhout,E., de Wijze,D.L., Dirks,R.P.,
Minegishi,Y., Jansen,H.J., Spaink,H.P., Dufour,S., Weltzien,F.A.,
Tsukamoto,K. and van den Thillart,G.E.
TITLE Primitive Duplicate Hox Clusters in the European Eel's Genome
JOURNAL PLoS ONE 7 (2), E32231 (2012)
PUBMED 22384188
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 230324)
AUTHORS Henkel,C.V., Burgerhout,E., De Wijze,D.L., Dirks,R.P.,
Minegishi,Y., Jansen,H.J., Spaink,H.P., Dufour,S., Weltzien,F.-A.,
Tsukamoto,K. and Van den Thillart,G.E.
TITLE Direct Submission
JOURNAL Submitted (14-APR-2011) ZF-screens B.V., Niels Bohrweg 11, Leiden
2333 CA, The Netherlands
COMMENT * NOTE: This is a 'working draft' sequence. It currently
* consists of 65 contigs. Gaps between the contigs
* are represented as runs of N. The order of the pieces
* is believed to be correct as given, however the sizes
* of the gaps between them are based on estimates that have
* provided by the submitter.
* This sequence will be replaced
* by the finished sequence as soon as it is available and
* the accession number will be preserved.
* 1 1176: contig of 1176 bp in length
* 1177 1276: gap of unknown length
* 1277 2427: contig of 1151 bp in length
* 2428 2527: gap of unknown length
* 2528 3200: contig of 673 bp in length
* 3201 3300: gap of unknown length
* 3301 3917: contig of 617 bp in length
* 3918 4017: gap of unknown length
* 4018 4298: contig of 281 bp in length
* 4299 4398: gap of unknown length
* 4399 6521: contig of 2123 bp in length
* 6522 6621: gap of unknown length
* 6622 6992: contig of 371 bp in length
* 6993 7092: gap of unknown length
* 7093 10290: contig of 3198 bp in length
* 10291 10390: gap of unknown length
* 10391 12883: contig of 2493 bp in length
* 12884 12983: gap of unknown length
* 12984 21124: contig of 8141 bp in length
* 21125 21224: gap of unknown length
* 21225 22135: contig of 911 bp in length
* 22136 22235: gap of unknown length
* 22236 23183: contig of 948 bp in length
* 23184 23283: gap of unknown length
* 23284 24190: contig of 907 bp in length
* 24191 24290: gap of unknown length
* 24291 25776: contig of 1486 bp in length
* 25777 25876: gap of unknown length
* 25877 27243: contig of 1367 bp in length
* 27244 27343: gap of unknown length
* 27344 39844: contig of 12501 bp in length
* 39845 39944: gap of unknown length
* 39945 41457: contig of 1513 bp in length
* 41458 41557: gap of unknown length
* 41558 46168: contig of 4611 bp in length
* 46169 46268: gap of unknown length
* 46269 48912: contig of 2644 bp in length
* 48913 49012: gap of unknown length
* 49013 51807: contig of 2795 bp in length
* 51808 51907: gap of unknown length
* 51908 54204: contig of 2297 bp in length
* 54205 54304: gap of unknown length
* 54305 55953: contig of 1649 bp in length
* 55954 56053: gap of unknown length
* 56054 57260: contig of 1207 bp in length
* 57261 57360: gap of unknown length
* 57361 60896: contig of 3536 bp in length
* 60897 60996: gap of unknown length
* 60997 63535: contig of 2539 bp in length
* 63536 63635: gap of unknown length
* 63636 67756: contig of 4121 bp in length
* 67757 67856: gap of unknown length
* 67857 68824: contig of 968 bp in length
* 68825 68924: gap of unknown length
* 68925 69594: contig of 670 bp in length
* 69595 69694: gap of unknown length
* 69695 74309: contig of 4615 bp in length
* 74310 74409: gap of unknown length
* 74410 83976: contig of 9567 bp in length
* 83977 84076: gap of unknown length
* 84077 86836: contig of 2760 bp in length
* 86837 86936: gap of unknown length
* 86937 88516: contig of 1580 bp in length
* 88517 88616: gap of unknown length
* 88617 88642: contig of 26 bp in length
* 88643 88742: gap of unknown length
* 88743 89573: contig of 831 bp in length
* 89574 89673: gap of unknown length
* 89674 90550: contig of 877 bp in length
* 90551 90650: gap of unknown length
* 90651 92490: contig of 1840 bp in length
* 92491 92590: gap of unknown length
* 92591 106650: contig of 14060 bp in length
* 106651 106750: gap of unknown length
* 106751 109425: contig of 2675 bp in length
* 109426 109525: gap of unknown length
* 109526 110052: contig of 527 bp in length
* 110053 110152: gap of unknown length
* 110153 110594: contig of 442 bp in length
* 110595 110694: gap of unknown length
* 110695 110989: contig of 295 bp in length
* 110990 111089: gap of unknown length
* 111090 111387: contig of 298 bp in length
* 111388 111487: gap of unknown length
* 111488 113808: contig of 2321 bp in length
* 113809 113908: gap of unknown length
* 113909 118669: contig of 4761 bp in length
* 118670 118769: gap of unknown length
* 118770 126134: contig of 7365 bp in length
* 126135 126234: gap of unknown length
* 126235 126299: contig of 65 bp in length
* 126300 126399: gap of unknown length
* 126400 126889: contig of 490 bp in length
* 126890 126989: gap of unknown length
* 126990 137067: contig of 10078 bp in length
* 137068 137167: gap of unknown length
* 137168 145879: contig of 8712 bp in length
* 145880 145979: gap of unknown length
* 145980 146284: contig of 305 bp in length
* 146285 146384: gap of unknown length
* 146385 150276: contig of 3892 bp in length
* 150277 150376: gap of unknown length
* 150377 152756: contig of 2380 bp in length
* 152757 152856: gap of unknown length
* 152857 155544: contig of 2688 bp in length
* 155545 155644: gap of unknown length
* 155645 183844: contig of 28200 bp in length
* 183845 183944: gap of unknown length
* 183945 191022: contig of 7078 bp in length
* 191023 191122: gap of unknown length
* 191123 193092: contig of 1970 bp in length
* 193093 193192: gap of unknown length
* 193193 193971: contig of 779 bp in length
* 193972 194071: gap of unknown length
* 194072 208128: contig of 14057 bp in length
* 208129 208228: gap of unknown length
* 208229 211371: contig of 3143 bp in length
* 211372 211471: gap of unknown length
* 211472 223250: contig of 11779 bp in length
* 223251 223350: gap of unknown length
* 223351 226670: contig of 3320 bp in length
* 226671 226770: gap of unknown length
* 226771 227176: contig of 406 bp in length
* 227177 227276: gap of unknown length
* 227277 228204: contig of 928 bp in length
* 228205 228304: gap of unknown length
* 228305 228874: contig of 570 bp in length
* 228875 228974: gap of unknown length
* 228975 230324: contig of 1350 bp in length.
FEATURES Qualifiers
source /organism="Anguilla anguilla"
/mol_type="genomic DNA"
/db_xref="taxon:7936"
/clone="scaffold330_rev_HoxB"
protein /gene="HoxB2a"
intron_pos 138:1 (1/1)
BEGIN
1 MNFEFERETG FINSQPSLAE CLTSFPTVLE SFQTSSIKDS TLIPPPFEHT IPSLDPRANG
61 QARPRSQKRS ANGLLLRTTQ QQGPAAPESG GPLAPEFPWM KEKKSAKKCQ KTGYATASSS
121 PSPASSGFGA SGLESPTETQ SGPDNGGGSR RLRTAYTNTQ LLELEKEFHF NKYLCRPRRV
181 EIAALLDLTE RQVKVWFQNR RMKHKRQTTY HKEGNDSDTG GFEPMEGADA ASPYSNQPFE
241 ASGSAVSESE SCNSASYPNS NDNNQHAPEE SLSTRPESAP TPDKNVGFPQ YPTPTADNPA
301 TMGNCCASGP DNTFPEPRDA ASLTDLNLFT TDSCLQISDA LSPSLQSSLD SPVDFSEEDF
361 DLFTSTLCTI DLQHLQF
//