LOCUS AEE90170.1 243 aa PRT HTG 12-MAR-2012
DEFINITION Anguilla anguilla homeobox B4a protein.
ACCESSION JF891394-8
PROTEIN_ID AEE90170.1
SOURCE Anguilla anguilla (European eel)
ORGANISM Anguilla anguilla
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Anguilliformes;
Anguillidae; Anguilla.
REFERENCE 1 (bases 1 to 230324)
AUTHORS Henkel,C.V., Burgerhout,E., de Wijze,D.L., Dirks,R.P.,
Minegishi,Y., Jansen,H.J., Spaink,H.P., Dufour,S., Weltzien,F.A.,
Tsukamoto,K. and van den Thillart,G.E.
TITLE Primitive Duplicate Hox Clusters in the European Eel's Genome
JOURNAL PLoS ONE 7 (2), E32231 (2012)
PUBMED 22384188
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 230324)
AUTHORS Henkel,C.V., Burgerhout,E., De Wijze,D.L., Dirks,R.P.,
Minegishi,Y., Jansen,H.J., Spaink,H.P., Dufour,S., Weltzien,F.-A.,
Tsukamoto,K. and Van den Thillart,G.E.
TITLE Direct Submission
JOURNAL Submitted (14-APR-2011) ZF-screens B.V., Niels Bohrweg 11, Leiden
2333 CA, The Netherlands
COMMENT * NOTE: This is a 'working draft' sequence. It currently
* consists of 65 contigs. Gaps between the contigs
* are represented as runs of N. The order of the pieces
* is believed to be correct as given, however the sizes
* of the gaps between them are based on estimates that have
* provided by the submitter.
* This sequence will be replaced
* by the finished sequence as soon as it is available and
* the accession number will be preserved.
* 1 1176: contig of 1176 bp in length
* 1177 1276: gap of unknown length
* 1277 2427: contig of 1151 bp in length
* 2428 2527: gap of unknown length
* 2528 3200: contig of 673 bp in length
* 3201 3300: gap of unknown length
* 3301 3917: contig of 617 bp in length
* 3918 4017: gap of unknown length
* 4018 4298: contig of 281 bp in length
* 4299 4398: gap of unknown length
* 4399 6521: contig of 2123 bp in length
* 6522 6621: gap of unknown length
* 6622 6992: contig of 371 bp in length
* 6993 7092: gap of unknown length
* 7093 10290: contig of 3198 bp in length
* 10291 10390: gap of unknown length
* 10391 12883: contig of 2493 bp in length
* 12884 12983: gap of unknown length
* 12984 21124: contig of 8141 bp in length
* 21125 21224: gap of unknown length
* 21225 22135: contig of 911 bp in length
* 22136 22235: gap of unknown length
* 22236 23183: contig of 948 bp in length
* 23184 23283: gap of unknown length
* 23284 24190: contig of 907 bp in length
* 24191 24290: gap of unknown length
* 24291 25776: contig of 1486 bp in length
* 25777 25876: gap of unknown length
* 25877 27243: contig of 1367 bp in length
* 27244 27343: gap of unknown length
* 27344 39844: contig of 12501 bp in length
* 39845 39944: gap of unknown length
* 39945 41457: contig of 1513 bp in length
* 41458 41557: gap of unknown length
* 41558 46168: contig of 4611 bp in length
* 46169 46268: gap of unknown length
* 46269 48912: contig of 2644 bp in length
* 48913 49012: gap of unknown length
* 49013 51807: contig of 2795 bp in length
* 51808 51907: gap of unknown length
* 51908 54204: contig of 2297 bp in length
* 54205 54304: gap of unknown length
* 54305 55953: contig of 1649 bp in length
* 55954 56053: gap of unknown length
* 56054 57260: contig of 1207 bp in length
* 57261 57360: gap of unknown length
* 57361 60896: contig of 3536 bp in length
* 60897 60996: gap of unknown length
* 60997 63535: contig of 2539 bp in length
* 63536 63635: gap of unknown length
* 63636 67756: contig of 4121 bp in length
* 67757 67856: gap of unknown length
* 67857 68824: contig of 968 bp in length
* 68825 68924: gap of unknown length
* 68925 69594: contig of 670 bp in length
* 69595 69694: gap of unknown length
* 69695 74309: contig of 4615 bp in length
* 74310 74409: gap of unknown length
* 74410 83976: contig of 9567 bp in length
* 83977 84076: gap of unknown length
* 84077 86836: contig of 2760 bp in length
* 86837 86936: gap of unknown length
* 86937 88516: contig of 1580 bp in length
* 88517 88616: gap of unknown length
* 88617 88642: contig of 26 bp in length
* 88643 88742: gap of unknown length
* 88743 89573: contig of 831 bp in length
* 89574 89673: gap of unknown length
* 89674 90550: contig of 877 bp in length
* 90551 90650: gap of unknown length
* 90651 92490: contig of 1840 bp in length
* 92491 92590: gap of unknown length
* 92591 106650: contig of 14060 bp in length
* 106651 106750: gap of unknown length
* 106751 109425: contig of 2675 bp in length
* 109426 109525: gap of unknown length
* 109526 110052: contig of 527 bp in length
* 110053 110152: gap of unknown length
* 110153 110594: contig of 442 bp in length
* 110595 110694: gap of unknown length
* 110695 110989: contig of 295 bp in length
* 110990 111089: gap of unknown length
* 111090 111387: contig of 298 bp in length
* 111388 111487: gap of unknown length
* 111488 113808: contig of 2321 bp in length
* 113809 113908: gap of unknown length
* 113909 118669: contig of 4761 bp in length
* 118670 118769: gap of unknown length
* 118770 126134: contig of 7365 bp in length
* 126135 126234: gap of unknown length
* 126235 126299: contig of 65 bp in length
* 126300 126399: gap of unknown length
* 126400 126889: contig of 490 bp in length
* 126890 126989: gap of unknown length
* 126990 137067: contig of 10078 bp in length
* 137068 137167: gap of unknown length
* 137168 145879: contig of 8712 bp in length
* 145880 145979: gap of unknown length
* 145980 146284: contig of 305 bp in length
* 146285 146384: gap of unknown length
* 146385 150276: contig of 3892 bp in length
* 150277 150376: gap of unknown length
* 150377 152756: contig of 2380 bp in length
* 152757 152856: gap of unknown length
* 152857 155544: contig of 2688 bp in length
* 155545 155644: gap of unknown length
* 155645 183844: contig of 28200 bp in length
* 183845 183944: gap of unknown length
* 183945 191022: contig of 7078 bp in length
* 191023 191122: gap of unknown length
* 191123 193092: contig of 1970 bp in length
* 193093 193192: gap of unknown length
* 193193 193971: contig of 779 bp in length
* 193972 194071: gap of unknown length
* 194072 208128: contig of 14057 bp in length
* 208129 208228: gap of unknown length
* 208229 211371: contig of 3143 bp in length
* 211372 211471: gap of unknown length
* 211472 223250: contig of 11779 bp in length
* 223251 223350: gap of unknown length
* 223351 226670: contig of 3320 bp in length
* 226671 226770: gap of unknown length
* 226771 227176: contig of 406 bp in length
* 227177 227276: gap of unknown length
* 227277 228204: contig of 928 bp in length
* 228205 228304: gap of unknown length
* 228305 228874: contig of 570 bp in length
* 228875 228974: gap of unknown length
* 228975 230324: contig of 1350 bp in length.
FEATURES Qualifiers
source /organism="Anguilla anguilla"
/mol_type="genomic DNA"
/db_xref="taxon:7936"
/clone="scaffold330_rev_HoxB"
protein /gene="HoxB4a"
intron_pos 138:1 (1/1)
BEGIN
1 MAMSSFLINS NYVDPKFPPC EEYSQNDYLP SHSPDYYSAQ RRETAFQDEP MYHQRSGCAD
61 PPFTPCQGPG HPTAVMSPRA HVLPQTGLSN PLPETNSHHC HSATPSPPPS VNQSNSSSSS
121 CKDPVVYPWM KKVHVNIVNP NYTGGEPKRS RTAYTRQQVL ELEKEFHYNR YLTRRRRVEI
181 AHTLCLSERQ IKIWFQNRRM KWKKDHKLPN TKIRSTNSSS SNTRDSQTHG NSQSRTSGPP
241 SSL
//