LOCUS AEE81883.2 2235 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA polymerase II transcription mediator
protein.
ACCESSION CP002687-97
PROTEIN_ID AEE81883.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CCT"
/locus_tag="AT4G00450"
/gene_synonym="A_IG005I10.24"
/gene_synonym="A_IG005I10_24"
/gene_synonym="CENTER CITY"
/gene_synonym="CRP"
/gene_synonym="CRYPTIC PRECOCIOUS"
/gene_synonym="F5I10.24"
/gene_synonym="F5I10_24"
/gene_synonym="GCT"
/gene_synonym="GRAND CENTRAL"
/gene_synonym="MED12"
/gene_synonym="mediator 12"
/inference="Similar to RNA sequence,
EST:INSD:AV545836.1,INSD:AI999580.1,INSD:AV543848.1,
INSD:ES164604.1,INSD:AU237597.1,INSD:CD529092.1,
INSD:EL033770.1,INSD:DR374005.1,INSD:ES010733.1,
INSD:BP607528.1,INSD:AV528896.1,INSD:BE530143.1,
INSD:AU228675.1,INSD:EL310640.1,INSD:EL127034.1,
INSD:EL988036.1,INSD:AV543265.1,INSD:ES076930.1,
INSD:AV529730.1,INSD:EH812007.1,INSD:EH864498.1,
INSD:ES006804.1,INSD:EH904757.1,INSD:CO048765.1,
INSD:DR259399.1,INSD:AV523257.1,INSD:ES137132.1,
INSD:AV554827.1,INSD:DR259398.1,INSD:EH891090.1,
INSD:BX838391.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK229105.1"
/note="CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II
transcription mediator activity; INVOLVED IN:
photoperiodism, flowering, regulation of development,
heterochronic, regulation of radial pattern formation;
LOCATED IN: mediator complex, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Mediator complex, subunit
Med12 (InterPro:IPR019035); Has 216 Blast hits to 184
proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa
- 42; Fungi - 65; Plants - 86; Viruses - 0; Other
Eukaryotes - 23 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00450"
/db_xref="Araport:AT4G00450"
intron_pos 42:2 (1/11)
intron_pos 62:2 (2/11)
intron_pos 98:0 (3/11)
intron_pos 121:0 (4/11)
intron_pos 139:0 (5/11)
intron_pos 174:0 (6/11)
intron_pos 223:0 (7/11)
intron_pos 338:0 (8/11)
intron_pos 1110:2 (9/11)
intron_pos 1980:2 (10/11)
intron_pos 2085:0 (11/11)
BEGIN
1 MQRYHAANCT SAVNNSAIGG ASARDSGRAD SSSIGNYSLN SRRPPPLTPY KLKCEKDGLN
61 SRLGPPDFHP PTSNSPEENL TKEYVQFGYK ETVDGLKESE EIILSQVHTF SKPVVHKCKE
121 AVRKCLRAIN ESRALKRKAG QVYGVPLSGS LLCKPGFPEQ RSCGEETKKR WIESLSQQHK
181 RLRSLADNIP GYRRKTLFEV LIRNNVPLLR ATWFIKVTYL NQVRPSPAAI SSGTPDKTQA
241 SRCEQWTKDV IEYLQYLLDE LLSRNSSFPA QQTRDRSPQM LYTGSMQKNS PASTSLYGEE
301 TSLHFKWWYM VRLLQWHHAE GLLFPNLIVD WVLKLLQEKE IFEILQLLLP IVYGVLESIV
361 LSQTYVQSLV AIAVRFIQEP APGGSDLVDN SRRAYTLSAL IEMVRYLVLA APDTFVASDF
421 FPLPPSVAAC GPNDVSYTSK AYENLEKLRS NSAEISAQFQ GRGVLSRFEF LSFDYTISTI
481 QRSADDLAKI ASAGYPQHNV AKAVQALDKA LSDGDIRAAY SYLFEDLCNG AVDEAWITDV
541 SPCLRSSLRW IGAISTSFVC SVFFLIEWAT CDFRDFRAGV PKDIKFSGRK DCSQVYLVIQ
601 LLKQKILGGE FTARKGKNCR NNFLGVSKPS GSMDAFESPG PLHDIIVCWI DQHEVHKGGA
661 KRLQLLVFEL IRSGIFNPIA YVRQLIVSGM IDVIQPAVDP ERRMRHHRIL KQLPGCFVHE
721 TLEEAQLFGG DKLSEAVRTY SNERRLLLRE LLVEKGKYWN NLVLSDQKSK KISTSLSSVI
781 FPRACNAKSN SKGPRKHTKS SVDIRELKER ISALLQFPGM SCGVETPVRD EFQNSVKRSS
841 GSVYSKMDQP EATPGCEDCR RAKRPKMNDE KSSCYQGNSP IASDEEDNWW IKKGSKTVES
901 SLKVDPQIEI TKQVPRGRQK MARKTQSLAQ LQAARIEGSQ GASTSHVCDN KVSCPHHGPG
961 VEGENQKVVD VFRTSTPVDM VSVGNSLKQL QFVDKRSIAV WLTTAVRQLV EEPQKSSVRV
1021 GQFNRGAPVE EKNTIRWKLG ADELYSILFL LDISLDLVSA VKFLLWLLPK ANSTPSFAVQ
1081 GGRNLVTVPR NVENNMCEIG EAILVSSLRR YENILLSADL VPEAMTALMN RAASLMSSNG
1141 KISGSAALVY TRYILKRYGS LPSVVEWHNN FKATSEKKLL SELDHTRSGN GEYGNPLGVP
1201 AGVDNPDDYL RKKISIGGAR PSRVGLSMRD VLQRHVEEAT HYLKKLIGTG TMKASLAEKN
1261 DDGYQVAQQI VVGLMDCIRQ TGGAAQEGDP SLVSSAVSAI INSVGLSVAR ITDFSLGNIY
1321 QNHPSGVDSS NIARYILRIH ITCLCLLKEA LGERQSRVFE IALATESSTA LTGVFAPVKG
1381 SRGQHQLSPE SYDSNANNST IDMSNGTGKM ALSRATKITA AVSALVIGSI THGVITLERI
1441 VGLLRLKDYL DFVQFVRRTK SSSNGSARSM GASKVESPIE VYVHWFRLLV GNCKTVSEGL
1501 VLELVGESSV VAISRMQRML PLKLVFPPAY SIIAFVLWRP FVSNSNSNSS VHEDTHRLYQ
1561 SLTMAFHDVI KHLPFRDVCF RDTQGLYELI VADSTDAEFA SVFESHGLDM HLKSVAFAPL
1621 RARLFLNSLI DCKVPSSGYS HEGVSEAKNR HQGNGTKLVD KLVSVLDCLQ PAKFHWQWVE
1681 LRLLLNEQAL AEKLENHDMP LTDAIRSSCP TSEKPDASEN EKNFIQILLT RLLVRPDAVP
1741 LFSEVVHLFG RSVEDSMLKQ AEWFLAGQDV LFGRKTIRQK LIIVGESKGL PTKPQFWKPW
1801 GWCNSSSSDH ITANKAGKKR KFEITSIEEG EVIEEGSGSR KVLLPRVLDE NSPSVGYGIT
1861 TERAFVQLVL PCIDQSSDES RSTFVNELVR QFSNIEQQLS SVTNRSTTSN KQMGTASSGS
1921 EISSNKGSTR KGLRGGSPSL ARRSSANTTD TSPPPSPAAL RASMSLRLQF LLRLLPVICG
1981 EPSFKNTRHA LASTIVRLLG SRVVYEDYAV CSPRSELSKA ETESTIDPSS MADLSSEVLF
2041 DRLLFVLHGL LSNHQPKWLK PRPSSNESSK DFTLFDRDAA ESLQNELSRM QLPDTIRWRI
2101 QAAMPILLPS LRCSLSCQPH SVPPTALTLV QPSGSTAAAG TNQRNSPAIS KSGTAAAQGK
2161 LKPTMLAPHQ QQEADNTDVV DPWTLLEDGT SSGLSSSNAS NSSDMANLRA TCWLKGAVRV
2221 RRTDLTYVGS VDDDS
//