LOCUS AEE81814.1 1187 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana BREAST CANCER 2 like 2A protein.
ACCESSION CP002687-2
PROTEIN_ID AEE81814.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="BRCA2(IV)"
/locus_tag="AT4G00020"
/gene_synonym="BRCA2A"
/gene_synonym="BREAST CANCER 2 like 2A"
/gene_synonym="EDA20"
/gene_synonym="EMBRYO SAC DEVELOPMENT ARREST 20"
/gene_synonym="F6N15.14"
/gene_synonym="F6N15_14"
/gene_synonym="MATERNAL EFFECT EMBRYO ARREST 43"
/gene_synonym="MEE43"
/inference="Similar to RNA sequence,
EST:INSD:EL004160.1,INSD:AV823859.1,INSD:EL994819.1,
INSD:EL329087.1,INSD:BP851639.1,INSD:ES020315.1"
/note="BREAST CANCER 2 like 2A (BRCA2(IV)); FUNCTIONS IN:
single-stranded DNA binding; INVOLVED IN: meiosis, embryo
sac morphogenesis, embryo sac development, embryo
development ending in seed dormancy; LOCATED IN: nucleus;
CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), DNA
recombination/repair protein BRCA2, helical domain
(InterPro:IPR015252), DNA recombination and repair
protein, BRCA2 (InterPro:IPR011370), Breast cancer type 2
susceptibility protein (InterPro:IPR015525), BRCA2,
oligonucleotide/oligosaccharide-binding 1
(InterPro:IPR015187), BRCA2 repeat (InterPro:IPR002093);
BEST Arabidopsis thaliana protein match is: BRCA2-like B
(TAIR:AT5G01630.1); Has 319 Blast hits to 211 proteins in
92 species: Archae - 0; Bacteria - 11; Metazoa - 140;
Fungi - 22; Plants - 61; Viruses - 0; Other Eukaryotes -
85 (source: NCBI BLink)."
/db_xref="TAIR:AT4G00020"
/db_xref="Araport:AT4G00020"
intron_pos 52:1 (1/21)
intron_pos 100:1 (2/21)
intron_pos 154:1 (3/21)
intron_pos 479:1 (4/21)
intron_pos 521:0 (5/21)
intron_pos 563:1 (6/21)
intron_pos 574:2 (7/21)
intron_pos 608:2 (8/21)
intron_pos 670:2 (9/21)
intron_pos 698:0 (10/21)
intron_pos 715:0 (11/21)
intron_pos 742:1 (12/21)
intron_pos 779:2 (13/21)
intron_pos 803:2 (14/21)
intron_pos 870:0 (15/21)
intron_pos 931:0 (16/21)
intron_pos 978:2 (17/21)
intron_pos 999:2 (18/21)
intron_pos 1068:0 (19/21)
intron_pos 1138:2 (20/21)
intron_pos 1146:1 (21/21)
BEGIN
1 MSTWQLFPDS SGDGFRWEVA GRILQSVSDS TPTKALESTA PLPSMADLLL QGCSKLIARE
61 EAMPGEIPMF RTGLGKSVVL KESSIAKAKS ILAEKVTYSD LRNTNCSIPQ MRQVDTAETL
121 PMFRTASGKS VPLKESSIAK AMSILGSDKI IDSDNVLPRE SGFGVSNSLF QTASNKKVNV
181 SSAGLARAKA LLGLEEDDLN GFNHVNQSSS SSQQHGWSGL KTHEEFDATV VKHHSGTPGQ
241 YEDYVSGKRS EVLNPSLKVP PTKFQTAGGK SLSVSAEALK RARNLLGDPE LGSFFDDVAG
301 GDQFFTPEKD ERLSDIAINN GSANRGYIAH EEKTSNKHTP NSFVSPLWSS SKQFSSVNLE
361 NLASGGNLIK KFDAAVDETD CALNATHGLS NNRSLASDMA VNNSKVNGFI PRGRQPGRPA
421 DQPLVDITNR RDTAYAYNKQ DSTQKKRLGK TVSVSPFKRP RISSFKTPSK KHALQASSGL
481 SVVSCDTLTS KKVLSTRYPE KSPRVYIKDF FGMHPTATTR MDYVPDHVRR IKSSNADKYV
541 FCDESSSNKV GAETFLQMLA ESEKVCDRSF EACMWIVWKL ACYDIYYPAK CRGNFLTITN
601 VLEELKYRYE REVNHGHCSA IKRILSGDAP ASSMMVLCIS AINPKTDNDS QEAHCSDSCS
661 NVKVELTDGW YSMNAALDVV LTKQLNAGKL FVGQKLRILG AGLSGWATPT SPLEAVISST
721 ICLLLNINGT YRAHWADRLG FCKEIGVPLA LNCIKCNGGP VPKTLAGIKR IYPILYKERL
781 GEKKSIVRSE RIESRIIQLH NQRRSALVEG IMCEYQRGIN GVHSQNDTDS EEGAKIFKLL
841 ETAAEPEFLM AEMSPEQLRS FTTYKAKFEA AQQMRKEKSV AETLEDAGLG ERNVTPFMRI
901 RLVGLTSLSY EGEHNPKEGI VTIWDPTERQ RTELTEGKIY MMKGLVPINS DSEILYLHAR
961 GSSSRWQPLS PKDSENFQPF FNPRKPISLS NLGEIPLSSE FDIAAYVVYV GNAYTDVLQK
1021 KQWVFVTDGS AQHSGEISNS LLAISFSTSF MDDSSVSHIS HNLVGSVVGF CNLIKRAKDV
1081 TNEIWVAEAA ENSVYFINAE AAYSSHLKTS SAHIQTWAKL SSSKSVRSRR LPLSIIIRVL
1141 SIIGACPSGL NSPDKCRAFN FFWSHSTLKL PHTAFQNRAM RVADKPP
//