LOCUS AEE81813.1 1151 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana BREAST CANCER 2 like 2A protein.
ACCESSION CP002687-3
PROTEIN_ID AEE81813.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="BRCA2(IV)"
/locus_tag="AT4G00020"
/gene_synonym="BRCA2A"
/gene_synonym="BREAST CANCER 2 like 2A"
/gene_synonym="EDA20"
/gene_synonym="EMBRYO SAC DEVELOPMENT ARREST 20"
/gene_synonym="F6N15.14"
/gene_synonym="F6N15_14"
/gene_synonym="MATERNAL EFFECT EMBRYO ARREST 43"
/gene_synonym="MEE43"
/inference="Similar to RNA sequence,
EST:INSD:ES121393.1,INSD:AV810377.1,INSD:EL004160.1,
INSD:AV784930.1,INSD:BP851639.1,INSD:BP623328.1,
INSD:ES197799.1,INSD:AV823859.1,INSD:EL329087.1,
INSD:EL994819.1,INSD:EG467749.1,INSD:ES020315.1,
INSD:EH921439.1"
/inference="Similar to RNA sequence, mRNA:INSD:AJ488304.1"
/note="BREAST CANCER 2 like 2A (BRCA2(IV)); FUNCTIONS IN:
single-stranded DNA binding; INVOLVED IN: meiosis, embryo
sac morphogenesis, embryo sac development, embryo
development ending in seed dormancy; LOCATED IN: nucleus;
CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), DNA
recombination/repair protein BRCA2, helical domain
(InterPro:IPR015252), DNA recombination and repair
protein, BRCA2 (InterPro:IPR011370), BRCA2,
oligonucleotide/oligosaccharide-binding 1
(InterPro:IPR015187), Breast cancer type 2 susceptibility
protein (InterPro:IPR015525), BRCA2 repeat
(InterPro:IPR002093); BEST Arabidopsis thaliana protein
match is: BRCA2-like B (TAIR:AT5G01630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G00020"
/db_xref="Araport:AT4G00020"
intron_pos 52:1 (1/19)
intron_pos 100:1 (2/19)
intron_pos 154:1 (3/19)
intron_pos 479:1 (4/19)
intron_pos 521:0 (5/19)
intron_pos 572:2 (6/19)
intron_pos 613:2 (7/19)
intron_pos 675:2 (8/19)
intron_pos 703:0 (9/19)
intron_pos 720:0 (10/19)
intron_pos 747:1 (11/19)
intron_pos 784:2 (12/19)
intron_pos 808:2 (13/19)
intron_pos 875:0 (14/19)
intron_pos 936:0 (15/19)
intron_pos 983:2 (16/19)
intron_pos 1004:2 (17/19)
intron_pos 1073:0 (18/19)
intron_pos 1131:0 (19/19)
BEGIN
1 MSTWQLFPDS SGDGFRWEVA GRILQSVSDS TPTKALESTA PLPSMADLLL QGCSKLIARE
61 EAMPGEIPMF RTGLGKSVVL KESSIAKAKS ILAEKVTYSD LRNTNCSIPQ MRQVDTAETL
121 PMFRTASGKS VPLKESSIAK AMSILGSDKI IDSDNVLPRE SGFGVSNSLF QTASNKKVNV
181 SSAGLARAKA LLGLEEDDLN GFNHVNQSSS SSQQHGWSGL KTHEEFDATV VKHHSGTPGQ
241 YEDYVSGKRS EVLNPSLKVP PTKFQTAGGK SLSVSAEALK RARNLLGDPE LGSFFDDVAG
301 GDQFFTPEKD ERLSDIAINN GSANRGYIAH EEKTSNKHTP NSFVSPLWSS SKQFSSVNLE
361 NLASGGNLIK KFDAAVDETD CALNATHGLS NNRSLASDMA VNNSKVNGFI PRGRQPGRPA
421 DQPLVDITNR RDTAYAYNKQ DSTQKKRLGK TVSVSPFKRP RISSFKTPSK KHALQASSGL
481 SVVSCDTLTS KKVLSTRYPE KSPRVYIKDF FGMHPTATTR MDYVPDHVRR IKSSNADKYV
541 FCDESSSNKV GAETFLQMLA ESGASLQHAS RKWVTNHYRW IVWKLACYDI YYPAKCRGNF
601 LTITNVLEEL KYRYEREVNH GHCSAIKRIL SGDAPASSMM VLCISAINPK TDNDSQEAHC
661 SDSCSNVKVE LTDGWYSMNA ALDVVLTKQL NAGKLFVGQK LRILGAGLSG WATPTSPLEA
721 VISSTICLLL NINGTYRAHW ADRLGFCKEI GVPLALNCIK CNGGPVPKTL AGIKRIYPIL
781 YKERLGEKKS IVRSERIESR IIQLHNQRRS ALVEGIMCEY QRGINGVHSQ NDTDSEEGAK
841 IFKLLETAAE PEFLMAEMSP EQLRSFTTYK AKFEAAQQMR KEKSVAETLE DAGLGERNVT
901 PFMRIRLVGL TSLSYEGEHN PKEGIVTIWD PTERQRTELT EGKIYMMKGL VPINSDSEIL
961 YLHARGSSSR WQPLSPKDSE NFQPFFNPRK PISLSNLGEI PLSSEFDIAA YVVYVGNAYT
1021 DVLQKKQWVF VTDGSAQHSG EISNSLLAIS FSTSFMDDSS VSHISHNLVG SVVGFCNLIK
1081 RAKDVTNEIW VAEAAENSVY FINAEAAYSS HLKTSSAHIQ TWAKLSSSKS VIHELRQRVL
1141 SIIGACKSPS C
//