LOCUS AEE73670.1 272 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeobox 1 protein.
ACCESSION CP002686-109
PROTEIN_ID AEE73670.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HB-1"
/locus_tag="AT3G01470"
/gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 1"
/gene_synonym="ATHB-1"
/gene_synonym="ATHB1"
/gene_synonym="F4P13.2"
/gene_synonym="F4P13_2"
/gene_synonym="HAT5"
/gene_synonym="HD-ZIP-1"
/gene_synonym="homeobox 1"
/gene_synonym="HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS
THALIANA 5"
/inference="Similar to RNA sequence,
EST:INSD:EL231664.1,INSD:AV519756.1,INSD:EL312439.1,
INSD:AV552349.1,INSD:CD531827.1,INSD:EH972323.1,
INSD:EH892020.1,INSD:EG467919.1,INSD:EL261428.1,
INSD:AV795885.1,INSD:EG467920.1,INSD:EH856621.1,
INSD:EL053174.1,INSD:BP632451.1,INSD:CD534515.1,
INSD:BP609161.1,INSD:EL289109.1,INSD:CD533700.1,
INSD:AV439953.1,INSD:AV539075.1,INSD:EH846345.1,
INSD:BP574544.1,INSD:AV548906.1,INSD:EL048261.1,
INSD:EL033456.1,INSD:EL052565.1,INSD:EH881900.1,
INSD:BP800357.1,INSD:BP634249.1,INSD:AV558145.1,
INSD:EH856770.1,INSD:BP599794.1,INSD:EL301364.1,
INSD:N37129.1,INSD:EL089084.1,INSD:EH902634.1,
INSD:H37532.1,INSD:AV441876.1,INSD:BP602688.1,
INSD:EL305125.1,INSD:CK119587.1,INSD:DR751603.1,
INSD:BP610019.1,INSD:AV547756.1,INSD:CD534185.1,
INSD:BP843921.1,INSD:EL333214.1,INSD:BP613699.1,
INSD:BP608313.1,INSD:BP789497.1,INSD:EH985153.1,
INSD:EL001953.1,INSD:BP569833.1,INSD:EL172361.1,
INSD:EL323783.1,INSD:BP600575.1,INSD:EL043243.1,
INSD:BP852598.1,INSD:EH873870.1,INSD:EL227848.1,
INSD:EH859321.1,INSD:AV546133.1,INSD:AI997961.1,
INSD:BP788785.1,INSD:BX840984.1,INSD:DR751610.1,
INSD:AA713131.1,INSD:EL166363.1,INSD:BP605611.1,
INSD:AV797096.1,INSD:BU636361.1,INSD:AV815371.1,
INSD:EL013676.1,INSD:EL252257.1,INSD:BP634248.1,
INSD:N65401.1,INSD:T42311.1,INSD:AV551422.1,
INSD:BP852220.1,INSD:AV521515.1,INSD:BP614211.1,
INSD:T88663.1,INSD:EH944013.1,INSD:EL030681.1,
INSD:AV813420.1,INSD:DR278241.1,INSD:BP601037.1,
INSD:CD533698.1,INSD:BP615266.1,INSD:EL208966.1,
INSD:BP620441.1,INSD:BP576742.1,INSD:CD532303.1,
INSD:EL330120.1,INSD:EL192623.1,INSD:EL161153.1,
INSD:EG457822.1,INSD:DR278240.1,INSD:BP603040.1,
INSD:BP803921.1,INSD:BP610073.1,INSD:EH897075.1,
INSD:EL172868.1,INSD:AA395012.1,INSD:EL261107.1,
INSD:EL075913.1,INSD:AV524103.1,INSD:EL112787.1,
INSD:EG458038.1,INSD:DR382911.1,INSD:BP798732.1,
INSD:EL025857.1,INSD:EL245643.1,INSD:CB254248.1,
INSD:BP617675.1,INSD:EL133100.1,INSD:EL160387.1,
INSD:T42837.1,INSD:DR751611.1,INSD:AV564536.1,
INSD:AV539612.1,INSD:BP583928.1,INSD:EH869561.1,
INSD:EL339416.1,INSD:AV519253.1,INSD:EL192506.1,
INSD:AV819290.1,INSD:T23024.1,INSD:AI099655.1,
INSD:EL019347.1,INSD:EH798720.1,INSD:H37330.1,
INSD:CD528958.1,INSD:AV519469.1,INSD:EL080180.1,
INSD:BP613231.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823491.1,INSD:AY098972.1,INSD:BX822367.1,
INSD:BX823237.1,INSD:AY058188.1,INSD:X58821.1,
INSD:M90416.1"
/note="homeobox 1 (HB-1); FUNCTIONS IN: sequence-specific
DNA binding, DNA binding, transcription activator
activity, protein homodimerization activity,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: response to salt stress, response
to blue light, positive regulation of transcription,
regulation of transcription, DNA-dependent, leaf
morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: stem,
fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s:
Homeobox, conserved site (InterPro:IPR017970), Homeobox
(InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Helix-turn-helix motif, lambda-like
repressor (InterPro:IPR000047), Leucine zipper,
homeobox-associated (InterPro:IPR003106),
Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
thaliana protein match is: homeobox protein 16
(TAIR:AT4G40060.1); Has 12515 Blast hits to 12478 proteins
in 547 species: Archae - 0; Bacteria - 0; Metazoa - 9969;
Fungi - 258; Plants - 2039; Viruses - 5; Other Eukaryotes
- 244 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01470"
/db_xref="Araport:AT3G01470"
intron_pos 30:1 (1/3)
intron_pos 77:0 (2/3)
intron_pos 157:0 (3/3)
BEGIN
1 MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF
61 YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK KLGLQPRQVA VWFQNRRARW
121 KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE
181 PNQLDPVYIN AAAIKTEDRL SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH
241 DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
//