LOCUS AEE73657.1 1011 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CRM family member 2 protein.
ACCESSION CP002686-88
PROTEIN_ID AEE73657.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CFM2"
/locus_tag="AT3G01370"
/gene_synonym="Arabidopsis thaliana CRM family member 2"
/gene_synonym="ATCFM2"
/gene_synonym="CRM family member 2"
/gene_synonym="T13O15.1"
/gene_synonym="T13O15_1"
/inference="Similar to RNA sequence,
EST:INSD:ES064077.1,INSD:BP793889.1,INSD:ES111948.1,
INSD:BX841329.1,INSD:ES098202.1,INSD:AV828494.1,
INSD:BP854803.1,INSD:EL111813.1,INSD:EH892927.1,
INSD:ES157943.1,INSD:AV529993.1,INSD:EH876535.1,
INSD:DR262201.1,INSD:BX837172.1,INSD:EH908215.1,
INSD:BP609860.1,INSD:BP854222.1,INSD:ES083655.1,
INSD:AV559772.1,INSD:ES207275.1,INSD:DR262200.1,
INSD:EL222454.1,INSD:BP589774.1,INSD:EL327432.1,
INSD:ES207005.1,INSD:AV529412.1,INSD:BX841328.1,
INSD:AV828092.1,INSD:EL048217.1,INSD:AV800347.1,
INSD:ES038615.1,INSD:BP636134.1,INSD:BP600552.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822141.1,INSD:BT010594.1,INSD:AY136347.1"
/note="CRM family member 2 (CFM2); FUNCTIONS IN: RNA
binding; INVOLVED IN: Group I intron splicing, Group II
intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain
(InterPro:IPR001890); BEST Arabidopsis thaliana protein
match is: CRM family member 3B (TAIR:AT4G14510.1); Has
1269 Blast hits to 881 proteins in 154 species: Archae -
0; Bacteria - 46; Metazoa - 247; Fungi - 72; Plants - 683;
Viruses - 4; Other Eukaryotes - 217 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01370"
/db_xref="Araport:AT3G01370"
intron_pos 231:0 (1/12)
intron_pos 400:1 (2/12)
intron_pos 444:0 (3/12)
intron_pos 549:0 (4/12)
intron_pos 601:1 (5/12)
intron_pos 699:0 (6/12)
intron_pos 719:0 (7/12)
intron_pos 738:0 (8/12)
intron_pos 776:0 (9/12)
intron_pos 836:0 (10/12)
intron_pos 899:1 (11/12)
intron_pos 943:0 (12/12)
BEGIN
1 MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI
61 QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP LPKQLPIHRV GHTIDTSWST
121 PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR
181 LTKKLKIGKA GITEGIVNGI HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR
241 SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
301 VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV
361 PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG RNRNLQGLAV AIVKLWEKCE
421 LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR
481 QTMIMENSSV HGNKLTENEE EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE
541 KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
601 GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY
661 AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL KLHVLKLSNN IEELNRQLVE
721 DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG
781 EVDPLTTSSQ EYQEDESESA SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF
841 LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
901 SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY
961 RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA LIEAIRLECG L
//