LOCUS AEE73640.1 1360 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SIN3-like 1 protein.
ACCESSION CP002686-71
PROTEIN_ID AEE73640.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SNL1"
/locus_tag="AT3G01320"
/gene_synonym="SIN3-like 1"
/gene_synonym="T22N4.5"
/gene_synonym="T22N4_5"
/note="SIN3-like 1 (SNL1); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Histone
deacetylase interacting (InterPro:IPR013194), Paired
amphipathic helix (InterPro:IPR003822); BEST Arabidopsis
thaliana protein match is: SIN3-like 2
(TAIR:AT5G15020.2)."
/db_xref="TAIR:AT3G01320"
/db_xref="Araport:AT3G01320"
intron_pos 26:2 (1/21)
intron_pos 90:2 (2/21)
intron_pos 152:0 (3/21)
intron_pos 185:0 (4/21)
intron_pos 241:0 (5/21)
intron_pos 321:1 (6/21)
intron_pos 367:0 (7/21)
intron_pos 393:1 (8/21)
intron_pos 405:1 (9/21)
intron_pos 470:0 (10/21)
intron_pos 521:2 (11/21)
intron_pos 564:1 (12/21)
intron_pos 649:1 (13/21)
intron_pos 880:1 (14/21)
intron_pos 910:0 (15/21)
intron_pos 1103:0 (16/21)
intron_pos 1136:2 (17/21)
intron_pos 1183:0 (18/21)
intron_pos 1234:0 (19/21)
intron_pos 1289:2 (20/21)
intron_pos 1321:0 (21/21)
BEGIN
1 MKRIRDDVYA SGSQFRRPLG SSRGQLCGQS PVHGSGDTEE EEEGGSRRVS QKLTTNDALS
61 YLREVKEMFQ DQREKYDRFL EVMKDFKAQR TDTGGVIARV KELFKGHNNL IYGFNTFLPK
121 GYEITLIEED DALPKKTVEF EQAINFVNKI KMRFKHDEHV YKSFLEILNM YRKENKEIKE
181 VYNEVSILFQ GHLDLLEQFT RFLPASLPSH SAAQHSRSQA QQYSDRGSDP PLLHQMQVEK
241 ERRRERAVAL RGDYSVERYD LNDDKTMVKI QREQRKRLDK ENRARRGRDL DDREAGQDNL
301 HHFPEKRKSS RRAEALEAYS GMYKQAFVFC EKVKDRLCSQ DDYQTFLKCL NIFSNGIIQR
361 KDLQNLVSDL LGKFPDLMDE FNQFFERCES ITDGFQRLAG VMSKKLFSSE EQLSRPMKVE
421 EKESEHKPEL EAVKETEQCK KEYMGKSIQE LDLSDCECCT PSYRLLPADY PIPIASQRSE
481 LGAEVLNDHW VSVTSGSEDY SFKHMRRNQY EESLFRCEDD RFELDMLLES VSSAARSAES
541 LLNIITEKKI SFSGSFRIED HFTALNLRCI ERLYGDHGLD VIDILNKNPA TALPVILTRL
601 KQKQGEWKKC RDDFDKVWAN VYAKNHYKSL DHRSFYFKQQ DSKNLSAKSL LAEIKELKEK
661 SQNDDDVLLS ISAGYRQPIN PNLEYEYLNR AIHEDMFKVV QFSCEELCST KEQLSKVLRL
721 WENFLEAVLG VPPRAKGTDL VEDVVINPKT LDVNHSTSPN GEAAVSSGGD TARLASRKLK
781 SAANGDENSS SGTFKHGIGL LNKDSTGKEN LEDVEIANRD GVACSAVKPQ KEQETGNEAE
841 KRFGKPIPMD ISERAAISSI SIPSGAENNH CVVGKEVLPG AHEIQAKPSD TLTDIHHDVD
901 SIETVHSTQG GDVGNSIVLA NGLRSDSSKG TRNSDDPEGP SRNEKEEGEL SPNGDFEDNF
961 GVYKDHGVKS TSKPENSAEA EVEADAEVEN EDDADDVDSE NASEASGTES GGDVCSQDED
1021 REEENGEHDE IDGKAESEGE AEGMDPHLLE GESELLPQSE RVLLSVRPLS KHVAAVLCDE
1081 RTKDLQVFYG NDDFYVLFRL HQILYERILY AKRNCSGGEL KSKNLKDTNA GDPYARFMRV
1141 LYGLLDGSAE NTKFEDECRA IIGNQSYVLF TLDKLIYRLV KQLQAIVADE MDNKLLQLYE
1201 YEKSRKPGRV IDSVYYENVR VLVHEENIYR LECSSLPSRL SIQLMDNIIE KPEAYAVSMD
1261 PTFASYMQTE LLSVSSGKKE EGHDIVLQRN LTGLYDLCKA MEGVEVVNGL ECKMSCSSYK
1321 IAYVLDTEDY FHRKKKKKKT EQLWQRNKVR VERFHRFLSA
//