LOCUS AEE73621.1 792 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana starch synthase 2 protein.
ACCESSION CP002686-49
PROTEIN_ID AEE73621.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SS2"
/locus_tag="AT3G01180"
/gene_synonym="AtSS2"
/gene_synonym="starch synthase 2"
/gene_synonym="T4P13.13"
/gene_synonym="T4P13_13"
/inference="Similar to RNA sequence,
EST:INSD:AV529982.1,INSD:EG516523.1,INSD:EL037831.1,
INSD:BP792043.1,INSD:EL218324.1,INSD:EL321680.1,
INSD:EH823009.1,INSD:EL045357.1,INSD:EG472753.1,
INSD:AV555566.1,INSD:BP788980.1,INSD:AV524010.1,
INSD:AV523912.1,INSD:EG516522.1,INSD:BP561460.2,
INSD:AV524142.1,INSD:ES010338.1,INSD:AV786784.1,
INSD:ES211074.1,INSD:ES151689.1,INSD:AV791782.1,
INSD:ES162881.1,INSD:EH918223.1,INSD:EL066511.1,
INSD:AV801219.1,INSD:EL191368.1,INSD:EL223877.1,
INSD:BP780248.1,INSD:EH849601.1,INSD:EH800188.1,
INSD:BP781185.1,INSD:EH970682.1,INSD:ES137787.1,
INSD:AV525848.1,INSD:EL181546.1,INSD:ES195855.1,
INSD:AV518542.1,INSD:EL314126.1,INSD:AV441053.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY054467.1,INSD:BT002555.1"
/note="starch synthase 2 (SS2); FUNCTIONS IN: transferase
activity, transferring glycosyl groups; INVOLVED IN:
cellulose biosynthetic process, glucan biosynthetic
process, biosynthetic process, glycogen biosynthetic
process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose
type (InterPro:IPR011835), Starch synthase, catalytic
domain (InterPro:IPR013534), Glycosyl transferase, group 1
(InterPro:IPR001296); BEST Arabidopsis thaliana protein
match is: Glycogen/starch synthases, ADP-glucose type
(TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins
in 3394 species: Archae - 233; Bacteria - 4788; Metazoa -
1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other
Eukaryotes - 3944 (source: NCBI BLink)."
/db_xref="TAIR:AT3G01180"
/db_xref="Araport:AT3G01180"
intron_pos 95:0 (1/7)
intron_pos 317:1 (2/7)
intron_pos 339:0 (3/7)
intron_pos 365:0 (4/7)
intron_pos 402:0 (5/7)
intron_pos 417:0 (6/7)
intron_pos 475:0 (7/7)
BEGIN
1 MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV
61 EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK LVSSIKESTP DLDDAKASSK
121 QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS
181 ASVISSSPVT SPQKPSDVAT NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS
241 KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301 MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK
361 VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR LDILKRMVLF CKAAVEVPWY
421 VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD
481 DFSYVDLPSH YLDSFKLYDP VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH
541 NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601 PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR
661 DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA MNYGTIPVVH AVGGLRDTVQ
721 QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK
781 YEEVLVAAKY HW
//