LOCUS       AEE73617.2               274 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana polypyrimidine tract-binding protein
            1 protein.
ACCESSION   CP002686-43
PROTEIN_ID  AEE73617.2
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="PTB1"
                     /locus_tag="AT3G01150"
                     /gene_synonym="ATPTB1"
                     /gene_synonym="POLYPYRIMIDINE TRACT-BINDING"
                     /gene_synonym="polypyrimidine tract-binding protein 1"
                     /gene_synonym="POLYPYRIMIDINE TRACT-BINDING PROTEIN 1"
                     /gene_synonym="PTB"
                     /gene_synonym="T4P13.16"
                     /gene_synonym="T4P13_16"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES105956.1,INSD:EL124653.1,INSD:EG427811.1,
                     INSD:T42135.1,INSD:DR299213.1,INSD:ES020955.1,
                     INSD:CF774130.1,INSD:DR371069.1,INSD:EH897835.1,
                     INSD:T04473.1,INSD:EL265989.1,INSD:EL191737.1,
                     INSD:DR299216.1,INSD:DR299214.1,INSD:BE530321.1,
                     INSD:DR299211.1,INSD:ES016377.1,INSD:EL252275.1,
                     INSD:BP794786.1,INSD:DR299215.1,INSD:DR299217.1,
                     INSD:DR299208.1,INSD:ES168313.1,INSD:DR299218.1,
                     INSD:AV807552.1,INSD:AV809137.1,INSD:DR299210.1,
                     INSD:EL028796.1,INSD:AV441089.1,INSD:EL263814.1,
                     INSD:AV829325.1,INSD:AV536210.1,INSD:DR299206.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:BX823271.1"
                     /note="POLYPYRIMIDINE TRACT-BINDING (PTB); FUNCTIONS IN:
                     RNA binding, nucleotide binding, nucleic acid binding;
                     INVOLVED IN: pollen germination, regulation of RNA
                     splicing, regulation of translation; LOCATED IN: nucleus,
                     cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN:
                     28 plant structures; EXPRESSED DURING: 14 growth stages;
                     CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1
                     (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
                     (InterPro:IPR012677); BEST Arabidopsis thaliana protein
                     match is: polypyrimidine tract-binding protein 2
                     (TAIR:AT5G53180.1); Has 30201 Blast hits to 17322 proteins
                     in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
                     17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
                     Eukaryotes - 2996 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G01150"
                     /db_xref="Araport:AT3G01150"
     intron_pos      7:0 (1/7)
     intron_pos      28:0 (2/7)
     intron_pos      84:2 (3/7)
     intron_pos      104:0 (4/7)
     intron_pos      139:0 (5/7)
     intron_pos      166:1 (6/7)
     intron_pos      204:0 (7/7)
BEGIN
        1 MPIIGQVFSA FGFVHKIATF EKAAGFQALV QFTDVETASA ARSALDGRSI PRYLLSAHVG
       61 SCSLRMSYSA HTDLNIKFQS HRSRDYTNPY LPVNQTAMDG SMQPALGADG KKVESQSNVL
      121 LGLIENMQYA VTVDVLHTVF SAYGTVQKIA IFEKNGSTQA LIQYSDIPTA AMAKEALEGH
      181 CIYDGGYCKL RLSYSRHTDL NVKAFSDKSR DYTLPDLSLL VAQKGPAVSG SAPPAGWQNP
      241 QAQSQYSGYG GSPYMYPSSD PNGASPSGQP PYYG
//