LOCUS       AEE73616.1               399 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana polypyrimidine tract-binding protein
            1 protein.
ACCESSION   CP002686-41
PROTEIN_ID  AEE73616.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="PTB1"
                     /locus_tag="AT3G01150"
                     /gene_synonym="ATPTB1"
                     /gene_synonym="POLYPYRIMIDINE TRACT-BINDING"
                     /gene_synonym="polypyrimidine tract-binding protein 1"
                     /gene_synonym="POLYPYRIMIDINE TRACT-BINDING PROTEIN 1"
                     /gene_synonym="PTB"
                     /gene_synonym="T4P13.16"
                     /gene_synonym="T4P13_16"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES105956.1,INSD:EL124653.1,INSD:EG427811.1,
                     INSD:T42135.1,INSD:DR299213.1,INSD:ES020955.1,
                     INSD:CF774130.1,INSD:DR371069.1,INSD:EH897835.1,
                     INSD:T04473.1,INSD:DR299207.1,INSD:EL265989.1,
                     INSD:DR299212.1,INSD:EL191737.1,INSD:DR299216.1,
                     INSD:DR299214.1,INSD:BE530321.1,INSD:DR299211.1,
                     INSD:EL252275.1,INSD:ES016377.1,INSD:BP794786.1,
                     INSD:DR299215.1,INSD:DR299219.1,INSD:DR299217.1,
                     INSD:DR299208.1,INSD:ES168313.1,INSD:DR357367.1,
                     INSD:DR299218.1,INSD:AV807552.1,INSD:AV809137.1,
                     INSD:DR299210.1,INSD:EL028796.1,INSD:AV441089.1,
                     INSD:AV552212.1,INSD:EL263814.1,INSD:AV829325.1,
                     INSD:AV536210.1,INSD:DR299206.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BX823271.1,INSD:AF076924.1,INSD:BX825797.1,
                     INSD:BX822327.1"
                     /note="polypyrimidine tract-binding protein 1 (PTB1);
                     FUNCTIONS IN: RNA binding, nucleotide binding, nucleic
                     acid binding; INVOLVED IN: pollen germination, regulation
                     of RNA splicing, regulation of translation; LOCATED IN:
                     nucleus, cytoplasmic mRNA processing body, cytoplasm;
                     EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14
                     growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition
                     motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding,
                     alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis
                     thaliana protein match is: polypyrimidine tract-binding
                     protein 2 (TAIR:AT5G53180.1); Has 1792 Blast hits to 964
                     proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa
                     - 1278; Fungi - 41; Plants - 303; Viruses - 0; Other
                     Eukaryotes - 170 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G01150"
                     /db_xref="Araport:AT3G01150"
     intron_pos      62:0 (1/8)
     intron_pos      132:0 (2/8)
     intron_pos      153:0 (3/8)
     intron_pos      209:2 (4/8)
     intron_pos      229:0 (5/8)
     intron_pos      264:0 (6/8)
     intron_pos      291:1 (7/8)
     intron_pos      329:0 (8/8)
BEGIN
        1 MSSSGQTQFR YTQTPSKVVH LRNLPWECVE EELIDLCKRF GKIVNTKSNV GANRNQAFVE
       61 FADLNQAISM VSYYASSSEP AQIRGKTVYI QYSNRHEIVN NQSPGDVPGN VLLVTFEGVE
      121 SHEVSIDVIH LVFSAFGFVH KIATFEKAAG FQALVQFTDV ETASAARSAL DGRSIPRYLL
      181 SAHVGSCSLR MSYSAHTDLN IKFQSHRSRD YTNPYLPVNQ TAMDGSMQPA LGADGKKVES
      241 QSNVLLGLIE NMQYAVTVDV LHTVFSAYGT VQKIAIFEKN GSTQALIQYS DIPTAAMAKE
      301 ALEGHCIYDG GYCKLRLSYS RHTDLNVKAF SDKSRDYTLP DLSLLVAQKG PAVSGSAPPA
      361 GWQNPQAQSQ YSGYGGSPYM YPSSDPNGAS PSGQPPYYG
//