LOCUS AEE27283.1 361 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana pumilio 22 protein.
ACCESSION CP002684-99
PROTEIN_ID AEE27283.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /gene="PUM22"
/locus_tag="AT1G01410"
/gene_synonym="APUM22"
/gene_synonym="F6F3.21"
/gene_synonym="F6F3_21"
/gene_synonym="pumilio 22"
/note="pumilio 22 (PUM22); FUNCTIONS IN: RNA binding,
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; CONTAINS InterPro
DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313),
Armadillo-like helical (InterPro:IPR011989),
Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis
thaliana protein match is: ARM repeat superfamily protein
(TAIR:AT5G64490.1); Has 304 Blast hits to 271 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
65; Plants - 186; Viruses - 0; Other Eukaryotes - 52
(source: NCBI BLink)."
/db_xref="Araport:AT1G01410"
/db_xref="TAIR:AT1G01410"
BEGIN
1 MTHERGYDLA SQVLNICNVH HKKLFCHITY RHLLVLSSDD NGCVILKKVI TIADDFLKDE
61 FLDLIAQHAH SLSMHDLGIS LIQHVLELDF TKKTTQDDKR LHELMAEFDE VLSTSVTADV
121 DKLHKLASKL MLDSDLFFEF VITRRGSLMI QIILGKSEEV DQVILAGVKQ RFIDVTTNFY
181 GYRIMIQTIK VFKKRGDLKV YDQILRLIGV HALYLTKDPD MGNKTFQHAI NLHHQDCTTF
241 IACGLQSHYI ELSFLKHGSK IVEMLIDDRI SMVPLVLLMM EIVKCDEDTL VRLATDEYGN
301 NILKKFLALA KEHKEDFFGD LVDKLNPLLD SLRGTLGENI VAIIDSETEM VKDRIVSQGN
361 N
//