LOCUS AEE27273.1 706 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana cyclic nucleotide gated channel 10 protein.
ACCESSION CP002684-83
PROTEIN_ID AEE27273.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /gene="CNGC10"
/locus_tag="AT1G01340"
/gene_synonym="ACBK1"
/gene_synonym="ATCNGC10"
/gene_synonym="cyclic nucleotide gated channel 10"
/gene_synonym="F6F3.13"
/gene_synonym="F6F3_13"
/inference="Similar to RNA sequence,
EST:INSD:EL105473.1,INSD:EL055533.1,INSD:EL235784.1,
INSD:EL072738.1"
/inference="similar to RNA sequence, mRNA:INSD:AF272002.3"
/note="cyclic nucleotide gated channel 10 (CNGC10);
FUNCTIONS IN: ion channel activity, cyclic nucleotide
binding, calmodulin binding; INVOLVED IN: ion transport,
transmembrane transport; LOCATED IN: membrane; EXPRESSED
IN: 14 plant structures; EXPRESSED DURING: 10 growth
stages; CONTAINS InterPro DOMAIN/s: Cyclic
nucleotide-binding (InterPro:IPR000595), Ion transport
(InterPro:IPR005821), Cyclic nucleotide-binding-like
(InterPro:IPR018490), RmlC-like jelly roll fold
(InterPro:IPR014710), IQ calmodulin-binding region
(InterPro:IPR000048); BEST Arabidopsis thaliana protein
match is: cyclic nucleotide-gated channel 13
(TAIR:AT4G01010.1); Has 3364 Blast hits to 3209 proteins
in 253 species: Archae - 0; Bacteria - 35; Metazoa - 1554;
Fungi - 48; Plants - 1027; Viruses - 0; Other Eukaryotes -
700 (source: NCBI BLink)."
/db_xref="Araport:AT1G01340"
/db_xref="TAIR:AT1G01340"
intron_pos 180:0 (1/6)
intron_pos 251:0 (2/6)
intron_pos 349:2 (3/6)
intron_pos 387:0 (4/6)
intron_pos 466:0 (5/6)
intron_pos 597:2 (6/6)
BEGIN
1 MILFRFKDEG KPLSSEYGYG RKARPSLDRV FKNVKWGFKK PLSFPSHKDP DHKETSSVTR
61 KNIINPQDSF LQNWNKIFLF ACVVALAIDP LFFYIPIVDS ARHCLTLDSK LEIAASLLRT
121 LIDAFYIIHI VFQFRTAYIA PSSRVFGRGE LVDDAKAIAL KYLSSYFIID LLSILPLPQI
181 VVLAVIPSVN QPVSLLTKDY LKFSIIAQYV PRILRMYPLY TEVTRTSGIV TETAWAGAAW
241 NLSLYMLASH VFGALWYLIS VEREDRCWQE ACEKTKGCNM KFLYCENDRN VSNNFLTTSC
301 PFLDPGDITN STIFNFGIFT DALKSGVVES HDFWKKFFYC FWWGLRNLSA LGQNLQTSKF
361 VGEIIFAISI CISGLVLFAL LIGNMQKYLE STTVREEEMR VRKRDAEQWM SHRMLPEDLR
421 KRIRRYEQYR WQETRGVEEE TLLRNLPKDL RRDIKRHLCL DLLKKVPLFE IMDEQLLDAV
481 CDRLRPVLYT ENSYVIREGD PVGEMLFVMR GRLVSATTNG GRSGFFNAVN LKASDFCGED
541 LLPWALDPQS SSHFPISTRT VQALTEVEAF ALTAEDLKSV ASQFRRLHSK QLQHTFRFYS
601 VQWRTWSVSF IQAAWRRYCR RKLAKSLRDE EDRLREALAS QDKEHNAATV SSSLSLGGAL
661 YASRFASNAL HNLRHNISNL PPRYTLPLLP QKPTEPDFTA NHTTDP
//