LOCUS AEE27272.1 1787 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002684-78
PROTEIN_ID AEE27272.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /locus_tag="AT1G01320"
/gene_synonym="F6F3.12"
/gene_synonym="F6F3_12"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Tetratricopeptide-like helical
(InterPro:IPR011990), Tetratricopeptide repeat-containing
(InterPro:IPR013026), Tetratricopeptide repeat
(InterPro:IPR019734); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT4G28080.1)."
/db_xref="Araport:AT1G01320"
/db_xref="TAIR:AT1G01320"
intron_pos 21:1 (1/22)
intron_pos 42:0 (2/22)
intron_pos 73:0 (3/22)
intron_pos 97:1 (4/22)
intron_pos 192:1 (5/22)
intron_pos 215:0 (6/22)
intron_pos 259:0 (7/22)
intron_pos 273:0 (8/22)
intron_pos 446:0 (9/22)
intron_pos 497:2 (10/22)
intron_pos 669:0 (11/22)
intron_pos 690:0 (12/22)
intron_pos 724:0 (13/22)
intron_pos 833:0 (14/22)
intron_pos 864:0 (15/22)
intron_pos 898:0 (16/22)
intron_pos 933:0 (17/22)
intron_pos 977:2 (18/22)
intron_pos 1039:0 (19/22)
intron_pos 1083:0 (20/22)
intron_pos 1120:2 (21/22)
intron_pos 1151:0 (22/22)
BEGIN
1 MAPKNNRGKT KGDKKKKEEK VLPVIVDVIV NLPDETEAIL KGISTDRIID VRRLLSVNFD
61 TCHVTNYSLS HEIRGSRLKD TVDVSALKPC VLTLTEEDYN EGTAVAHVRR LLDIVACTTC
121 FGPSPEKSDS VKSAQVKGGG KNSKQSDTSP PPSPASKDTV VDEAGETSHS FPKLGSFYEF
181 FSLAHLTPPL QYIRLATKRE TEDIAKEDHL LSIDVKLCNG KLVHIEGCRK GFYSIGKQRI
241 ICHNLVDLLR QISRAFDNAY SDLLKAFSER NKFGNLPYGF RANTWLIPPT AAQSPAAFPP
301 LPVEDERWGG DGGGQGRDGS YDLVPWSNEF AFIASMPCKT AEERQVRDRK VFLLHNLFVD
361 VATFRAIKAV QKVMAEPVLA EEDSEVLYSE TVRDLTVTVT RDTSNASSKV DTKIDGIQAT
421 GLDKKKLMER NLLKGLTADE NTAAHDVATL GTISLKYCGY IAVVKLEKES EELSPPSQIV
481 DLLEQPEGGA NALNINSLRF LLHKSSPEQN KKTPQQHDDE LTSSREFVSK MLEESIAKLE
541 GEEIDRDSIM RWELGACWIQ HLQDQKNTEK DKKQTGEKSK NELKVEGLGK PLKSLNSSKK
601 KTDVSSPKTP QTALSSQVDA VSSEADTAAS LQSDAEKNAQ ENVLILKNLL SDAAFTRLKE
661 SDTGLHHKSL QELVDLAQNY YTEVAIPKLV ADFGSLELSP VDGRTLTDFM HTRGLRMRSL
721 GYVVKLSDKL SHVQSLCVHE MIVRALKHIL QAVISAVATD TDKIAIKVAA ALNMMLGIPE
781 NVAATPHNPW NVHPLIFRWL EKFLKKRYDY DLNAFSYKDL RKFAILRGLC HKVGIELIPR
841 DFDMDSPAPF RKTDVVSLVP VHKQAACSSA DGRQLLESSK TALDKGKLED AVTYGTKALA
901 KLVAVCGPYH RMTAGAYSLL AVVLYHTGDF NQATIYQQKA LDINERELGL DHPDTMKSYG
961 DLAVFYYRLQ HTELALKYVK RALYLLHLTC GPSHPNTAAT YINVAMMEEG LGNVHVALRY
1021 LHKALKCNQR LLGPDHIQTA ASYHAIAIAL SLMEAYHLSV QHEQTTLRIL RAKLGPDDLR
1081 TQDAAAWLEY FESKAFEQQE AARNGTPKPD ASIASKGHLS VSDLLDYINP SHNAKGKESV
1141 AAKRKNYILK EKSKQSNVSE HLVEIPREKQ KEMSEEDTEE TGSEEGKSSE ENHETILAPV
1201 EEPPSPPVIE DATMDNSNPI TSSDVSTEPQ HPDGSEDGWQ PVQRPRSAGS YGRRMKQRRA
1261 SIGKVYTYQK KNVEADIDNP LFQNATQQND KYYILKKRTA SYSSYADHHS PGLTTQGTKF
1321 GRKIVKTLAY RVKSTQPSSG NAKTAGETSE EDGLKTDASS VEPPTLSSTV QSEAYHTKNS
1381 VVSLGKSPSY KEVALAPPGS IAKYQVWVPQ AEVSDKQEDD EMEKKTEQGT SMELTRDEQM
1441 ITGLEEEVKK EISADPESNI TQGEEEIKVE LQPSEGVLGG SHINENDESG GGIQVEEQVE
1501 VELINDGVTD MIHSTREQQV IDQLAADSED LKAKLSISTT DSGDASRGLL PNKKLSASAA
1561 PFNPSSPPSI IRPTPIGMNI GPSWPVNMTL HHGPPPPYPS PPTTPNLMQP MSFVYPPPYS
1621 QSVPTSTYPV TSGPFHPNQF PWQLNVSDFV PRTVWPGCHP VEFPPPHMIT EPIAATVLEP
1681 TVILPTDIDT SGVEETKEGT QDVAVADEVM DSVNHVNNAV ARSETENGNR KSEEGEKTFS
1741 ILLRGRRNRK QTLRMPISLL NRPYDSQPFK LGYSRVIRDS EAPKSVA
//