LOCUS AEE27271.1 1797 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002684-80
PROTEIN_ID AEE27271.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /locus_tag="AT1G01320"
/gene_synonym="F6F3.12"
/gene_synonym="F6F3_12"
/inference="Similar to RNA sequence,
EST:INSD:EL151017.1,INSD:EH813969.1,INSD:EH882762.1,
INSD:AV523603.1,INSD:EH989499.1,INSD:EL052197.1,
INSD:BP839299.1,INSD:EL295504.1,INSD:AV522861.1,
INSD:AV523342.1,INSD:EL203825.1,INSD:BP835423.1,
INSD:EL274308.1,INSD:BP642899.1,INSD:EH955492.1,
INSD:AV831583.1,INSD:AV529314.1,INSD:EL283640.1,
INSD:EH936107.1,INSD:BP828358.1,INSD:AV816789.1,
INSD:EL282586.1,INSD:EH960077.1,INSD:EL054360.1,
INSD:AA650904.1,INSD:EL065833.1,INSD:EL150708.1,
INSD:EL249576.1,INSD:EL064264.1,INSD:EH874932.1,
INSD:EL287770.1,INSD:EL236743.1,INSD:EL156301.1,
INSD:ES028670.1,INSD:EH979570.1,INSD:EH932154.1,
INSD:EL292563.1,INSD:EL059722.1,INSD:EL022685.1,
INSD:EH856930.1,INSD:EL146295.1,INSD:EL261435.1,
INSD:EH830800.1,INSD:AV564051.1,INSD:AI999610.1,
INSD:EL172278.1,INSD:EL264965.1,INSD:EL192048.1,
INSD:AV523836.1,INSD:DR369067.1,INSD:EH797523.1,
INSD:EL220841.1,INSD:EH988479.1,INSD:EL054137.1,
INSD:EH804433.1,INSD:CB258338.1,INSD:ES047824.1,
INSD:AV529590.1,INSD:EH848879.1,INSD:EL107652.1,
INSD:EG516336.1,INSD:EL075495.1,INSD:EL135667.1,
INSD:EH914884.1,INSD:EH878352.1,INSD:EL203251.1,
INSD:BG459430.1,INSD:EL068573.1,INSD:CD532579.1,
INSD:EG439175.1,INSD:EL091725.1,INSD:CB260512.1,
INSD:AV529001.1,INSD:R30319.1,INSD:EL083980.1,
INSD:AV529355.1,INSD:EH805167.1,INSD:AV528397.1,
INSD:EL242796.1,INSD:EL330304.1,INSD:EL130916.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY080760.1,INSD:AK221066.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Tetratricopeptide-like helical
(InterPro:IPR011990), Tetratricopeptide repeat-containing
(InterPro:IPR013026), Tetratricopeptide repeat
(InterPro:IPR019734); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT4G28080.1); Has 12123 Blast hits to 4846
proteins in 494 species: Archae - 106; Bacteria - 3214;
Metazoa - 4973; Fungi - 1823; Plants - 555; Viruses - 79;
Other Eukaryotes - 1373 (source: NCBI BLink)."
/db_xref="Araport:AT1G01320"
/db_xref="TAIR:AT1G01320"
intron_pos 21:1 (1/22)
intron_pos 42:0 (2/22)
intron_pos 73:0 (3/22)
intron_pos 97:1 (4/22)
intron_pos 192:1 (5/22)
intron_pos 215:0 (6/22)
intron_pos 259:0 (7/22)
intron_pos 273:0 (8/22)
intron_pos 446:0 (9/22)
intron_pos 497:2 (10/22)
intron_pos 669:0 (11/22)
intron_pos 690:0 (12/22)
intron_pos 724:0 (13/22)
intron_pos 833:0 (14/22)
intron_pos 864:0 (15/22)
intron_pos 906:0 (16/22)
intron_pos 941:0 (17/22)
intron_pos 985:2 (18/22)
intron_pos 1047:0 (19/22)
intron_pos 1091:0 (20/22)
intron_pos 1128:2 (21/22)
intron_pos 1159:0 (22/22)
BEGIN
1 MAPKNNRGKT KGDKKKKEEK VLPVIVDVIV NLPDETEAIL KGISTDRIID VRRLLSVNFD
61 TCHVTNYSLS HEIRGSRLKD TVDVSALKPC VLTLTEEDYN EGTAVAHVRR LLDIVACTTC
121 FGPSPEKSDS VKSAQVKGGG KNSKQSDTSP PPSPASKDTV VDEAGETSHS FPKLGSFYEF
181 FSLAHLTPPL QYIRLATKRE TEDIAKEDHL LSIDVKLCNG KLVHIEGCRK GFYSIGKQRI
241 ICHNLVDLLR QISRAFDNAY SDLLKAFSER NKFGNLPYGF RANTWLIPPT AAQSPAAFPP
301 LPVEDERWGG DGGGQGRDGS YDLVPWSNEF AFIASMPCKT AEERQVRDRK VFLLHNLFVD
361 VATFRAIKAV QKVMAEPVLA EEDSEVLYSE TVRDLTVTVT RDTSNASSKV DTKIDGIQAT
421 GLDKKKLMER NLLKGLTADE NTAAHDVATL GTISLKYCGY IAVVKLEKES EELSPPSQIV
481 DLLEQPEGGA NALNINSLRF LLHKSSPEQN KKTPQQHDDE LTSSREFVSK MLEESIAKLE
541 GEEIDRDSIM RWELGACWIQ HLQDQKNTEK DKKQTGEKSK NELKVEGLGK PLKSLNSSKK
601 KTDVSSPKTP QTALSSQVDA VSSEADTAAS LQSDAEKNAQ ENVLILKNLL SDAAFTRLKE
661 SDTGLHHKSL QELVDLAQNY YTEVAIPKLV ADFGSLELSP VDGRTLTDFM HTRGLRMRSL
721 GYVVKLSDKL SHVQSLCVHE MIVRALKHIL QAVISAVATD TDKIAIKVAA ALNMMLGIPE
781 NVAATPHNPW NVHPLIFRWL EKFLKKRYDY DLNAFSYKDL RKFAILRGLC HKVGIELIPR
841 DFDMDSPAPF RKTDVVSLVP VHKTFYFKSM QQAACSSADG RQLLESSKTA LDKGKLEDAV
901 TYGTKALAKL VAVCGPYHRM TAGAYSLLAV VLYHTGDFNQ ATIYQQKALD INERELGLDH
961 PDTMKSYGDL AVFYYRLQHT ELALKYVKRA LYLLHLTCGP SHPNTAATYI NVAMMEEGLG
1021 NVHVALRYLH KALKCNQRLL GPDHIQTAAS YHAIAIALSL MEAYHLSVQH EQTTLRILRA
1081 KLGPDDLRTQ DAAAWLEYFE SKAFEQQEAA RNGTPKPDAS IASKGHLSVS DLLDYINPSH
1141 NAKGKESVAA KRKNYILKLK EKSKQSNVSE HLVEIPREKQ KEMSEEDTEE TGSEEGKSSE
1201 ENHETILAPV EEPPSPPVIE DATMDNSNPI TSSDVSTEPQ HPDGSEDGWQ PVQRPRSAGS
1261 YGRRMKQRRA SIGKVYTYQK KNVEADIDNP LFQNATQQND KYYILKKRTA SYSSYADHHS
1321 PGLTTQGTKF GRKIVKTLAY RVKSTQPSSG NAKTAGETSE EDGLKTDASS VEPPTLSSTV
1381 QSEAYHTKNS VVSLGKSPSY KEVALAPPGS IAKYQVWVPQ AEVSDKQEDD EMEKKTEQGT
1441 SMELTRDEQM ITGLEEEVKK EISADPESNI TQGEEEIKVE LQPSEGVLGG SHINENDESG
1501 GGIQVEEQVE VELINDGVTD MIHSTREQQV IDQLAADSED LKAKLSISTT DSGDASRGLL
1561 PNKKLSASAA PFNPSSPPSI IRPTPIGMNI GPSWPVNMTL HHGPPPPYPS PPTTPNLMQP
1621 MSFVYPPPYS QSVPTSTYPV TSGPFHPNQF PWQLNVSDFV PRTVWPGCHP VEFPPPHMIT
1681 EPIAATVLEP TVILPTDIDT SGVEETKEGT QDVAVADEVM DSVNHVNNAV ARSETENGNR
1741 KSEEGEKTFS ILLRGRRNRK QTLRMPISLL NRPYDSQPFK LGYSRVIRDS EAPKSVA
//