LOCUS AEE27248.1 229 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana GRF1-interacting factor 2 protein.
ACCESSION CP002684-42
PROTEIN_ID AEE27248.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /gene="GIF2"
/locus_tag="AT1G01160"
/gene_synonym="F6F3.29"
/gene_synonym="GRF1-interacting factor 2"
/inference="Similar to RNA sequence,
EST:INSD:ES196854.1,INSD:EH847280.1,INSD:EL051475.1,
INSD:BE530018.1,INSD:EH921359.1,INSD:H36066.1,
INSD:EL129047.1,INSD:BP584927.1,INSD:AU230317.1,
INSD:BP576014.1,INSD:EL263591.1,INSD:ES170211.1,
INSD:EL050425.1,INSD:EL991999.1,INSD:EL018630.1,
INSD:EL152428.1,INSD:EH889551.1,INSD:ES182075.1,
INSD:AI995719.1,INSD:ES039190.1,INSD:DR244441.1,
INSD:EL137885.1,INSD:DR378599.1,INSD:BP630850.1,
INSD:BP598859.1,INSD:BP862978.1,INSD:BP844949.1,
INSD:DR244443.1,INSD:ES191815.1,INSD:ES167179.1,
INSD:AU239051.1,INSD:EL238019.1,INSD:AV550033.1,
INSD:DR244442.1,INSD:BP847595.1,INSD:BP638938.1,
INSD:ES106922.1,INSD:ES200607.1,INSD:CF773210.1,
INSD:AV785233.1,INSD:BE038614.1,INSD:EH819492.1,
INSD:EH847530.1,INSD:EL973885.1,INSD:ES005198.1,
INSD:BE039533.1,INSD:BP844491.1,INSD:ES207516.1,
INSD:ES211121.1,INSD:EL992476.1,INSD:DR355195.1,
INSD:AV537923.1,INSD:BP666965.1,INSD:BP866794.1,
INSD:ES120038.1,INSD:EL281685.1,INSD:EH845075.1,
INSD:EL332238.1,INSD:ES046567.1,INSD:EL072897.1,
INSD:EL338473.1,INSD:EH954430.1,INSD:EL109725.1,
INSD:AV782048.1,INSD:EL220815.1,INSD:AV800424.1,
INSD:ES045681.1,INSD:ES139369.1,INSD:ES042427.1,
INSD:BP627610.1,INSD:BP858221.1,INSD:AV545121.1,
INSD:BP604933.1,INSD:F14391.1,INSD:BP666867.1,
INSD:ES153069.1,INSD:BP861750.1"
/note="GRF1-interacting factor 2 (GIF2); FUNCTIONS IN:
protein binding, transcription coactivator activity;
INVOLVED IN: cell proliferation, leaf development; LOCATED
IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT
(InterPro:IPR007726); BEST Arabidopsis thaliana protein
match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1);
Has 35 Blast hits to 35 proteins in 17 species: Archae -
0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="Araport:AT1G01160"
/db_xref="TAIR:AT1G01160"
intron_pos 30:0 (1/5)
intron_pos 64:0 (2/5)
intron_pos 89:2 (3/5)
intron_pos 126:0 (4/5)
intron_pos 210:1 (5/5)
BEGIN
1 MQQQQSPQMF PMVPSIPPAN NITTEQIQKM LGGSGNFESG FQEWTLKLDA CLMLLFCTFS
61 WLDYLDENKK LIMAIMENQN LGKLAECAQY QALLQKNLMY LAAIADAQPP PPTPGPSPST
121 AVAAQMATPH SGMQPPSYFM QHPQASPAGI FAPRGPLQFG SPLQFQDPQQ QQQIHQQAMQ
181 GHMGIRPMGM TNNGMQHAMQ QPETGLGGNV GLRGGKQDGA DGQGKDDGK
//