LOCUS AEE27247.1 195 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana GRF1-interacting factor 2 protein.
ACCESSION CP002684-43
PROTEIN_ID AEE27247.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /gene="GIF2"
/locus_tag="AT1G01160"
/gene_synonym="F6F3.29"
/gene_synonym="GRF1-interacting factor 2"
/inference="Similar to RNA sequence,
EST:INSD:ES196854.1,INSD:EH847280.1,INSD:EL051475.1,
INSD:BE530018.1,INSD:EH921359.1,INSD:H36066.1,
INSD:BP584927.1,INSD:EL129047.1,INSD:DR283667.1,
INSD:AU230317.1,INSD:BP576014.1,INSD:EL263591.1,
INSD:BP834088.1,INSD:ES170211.1,INSD:DR283664.1,
INSD:EL050425.1,INSD:EL018630.1,INSD:EL991999.1,
INSD:EL152428.1,INSD:EH889551.1,INSD:DR283670.1,
INSD:ES182075.1,INSD:AI995719.1,INSD:ES039190.1,
INSD:DR244441.1,INSD:F14390.1,INSD:EL137885.1,
INSD:BP812429.1,INSD:DR378599.1,INSD:BP630850.1,
INSD:BP598859.1,INSD:BP862978.1,INSD:BP844949.1,
INSD:DR244443.1,INSD:ES191815.1,INSD:DR283665.1,
INSD:AU239051.1,INSD:ES167179.1,INSD:EL238019.1,
INSD:AV550033.1,INSD:DR283668.1,INSD:DR244442.1,
INSD:BP847595.1,INSD:BP638938.1,INSD:ES106922.1,
INSD:CF773210.1,INSD:ES200607.1,INSD:AV785233.1,
INSD:BE038614.1,INSD:EH819492.1,INSD:AV824087.1,
INSD:EH847530.1,INSD:EL973885.1,INSD:BP823811.1,
INSD:ES005198.1,INSD:BE039533.1,INSD:BP844491.1,
INSD:ES207516.1,INSD:ES211121.1,INSD:EL992476.1,
INSD:DR355195.1,INSD:AV537923.1,INSD:DR283671.1,
INSD:BP666965.1,INSD:DR283666.1,INSD:BP866794.1,
INSD:ES120038.1,INSD:EL281685.1,INSD:EH845075.1,
INSD:EL332238.1,INSD:ES046567.1,INSD:EL072897.1,
INSD:EL338473.1,INSD:EL109725.1,INSD:EH954430.1,
INSD:AV782048.1,INSD:EL220815.1,INSD:AV800424.1,
INSD:ES045681.1,INSD:ES139369.1,INSD:ES042427.1,
INSD:DR283669.1,INSD:BP627610.1,INSD:BP858221.1,
INSD:BP836651.1,INSD:AV545121.1,INSD:BP604933.1,
INSD:F14391.1,INSD:BP666867.1,INSD:ES153069.1,
INSD:BP861750.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY102640.1,INSD:BX841803.1,INSD:AF410307.1,
INSD:AY102133.1"
/note="GRF1-interacting factor 2 (GIF2); CONTAINS InterPro
DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis
thaliana protein match is: GRF1-interacting factor 3
(TAIR:AT4G00850.1); Has 425 Blast hits to 425 proteins in
91 species: Archae - 0; Bacteria - 4; Metazoa - 291; Fungi
- 20; Plants - 89; Viruses - 0; Other Eukaryotes - 21
(source: NCBI BLink)."
/db_xref="Araport:AT1G01160"
/db_xref="TAIR:AT1G01160"
intron_pos 30:0 (1/4)
intron_pos 55:2 (2/4)
intron_pos 92:0 (3/4)
intron_pos 176:1 (4/4)
BEGIN
1 MQQQQSPQMF PMVPSIPPAN NITTEQIQKY LDENKKLIMA IMENQNLGKL AECAQYQALL
61 QKNLMYLAAI ADAQPPPPTP GPSPSTAVAA QMATPHSGMQ PPSYFMQHPQ ASPAGIFAPR
121 GPLQFGSPLQ FQDPQQQQQI HQQAMQGHMG IRPMGMTNNG MQHAMQQPET GLGGNVGLRG
181 GKQDGADGQG KDDGK
//