LOCUS AEE27241.1 528 aa PRT PLN 20-JUL-2017
DEFINITION Arabidopsis thaliana 3-ketoacyl-CoA synthase 1 protein.
ACCESSION CP002684-34
PROTEIN_ID AEE27241.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 30427671)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 30427671)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 30427671)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
protein /gene="KCS1"
/locus_tag="AT1G01120"
/gene_synonym="3-ketoacyl-CoA synthase 1"
/gene_synonym="T25K16.11"
/gene_synonym="T25K16_11"
/inference="Similar to RNA sequence,
EST:INSD:BP830277.1,INSD:BX840254.1,INSD:BP832693.1,
INSD:DR262933.1,INSD:BE522554.1,INSD:BP614297.1,
INSD:BE522553.1,INSD:ES040041.1,INSD:BP796729.1,
INSD:ES034156.1,INSD:EH819571.1,INSD:EL093119.1,
INSD:BP782151.1,INSD:BP777411.1,INSD:EL086421.1,
INSD:BP601790.1,INSD:EL059556.1,INSD:BP787435.1,
INSD:EL211028.1,INSD:AV550701.1,INSD:BP612682.1,
INSD:BP666921.1,INSD:DR356484.1,INSD:EH915374.1,
INSD:AA394957.1,INSD:BP836351.1,INSD:AV525396.1,
INSD:AV518820.1,INSD:AV793797.1,INSD:EL066416.1,
INSD:AV567670.1,INSD:EL045278.1,INSD:Z26005.1,
INSD:BP604225.1,INSD:T42377.1,INSD:AI999379.1,
INSD:AV806994.1,INSD:EG528556.1,INSD:EH943560.1,
INSD:EH819558.1,INSD:BP792870.1,INSD:DR262932.1,
INSD:EL223512.1,INSD:AV533301.1,INSD:AV538426.1,
INSD:EG528554.1,INSD:EL284818.1,INSD:ES139508.1,
INSD:EL012555.1,INSD:EL236670.1,INSD:EL115111.1,
INSD:EL222104.1,INSD:BP824813.2,INSD:AV800578.1,
INSD:DR356485.1,INSD:EL041820.1,INSD:BP840959.1,
INSD:EG528557.1,INSD:EL213812.1,INSD:BP608777.1,
INSD:AV815250.1,INSD:ES040469.1,INSD:EH929683.1,
INSD:BP598814.1,INSD:AV809340.1,INSD:N96054.1,
INSD:BP602678.1,INSD:EL195963.1,INSD:EL216331.1,
INSD:EL086792.1,INSD:BP601605.1,INSD:EL028053.1,
INSD:EL304824.1,INSD:BP834386.1,INSD:EL053375.1,
INSD:T44368.1,INSD:ES127589.1,INSD:EG528558.1,
INSD:ES051227.1,INSD:BP784987.1,INSD:EH952048.1,
INSD:EL076983.1,INSD:BP599087.1,INSD:AV829943.1,
INSD:BP596852.1,INSD:EL303624.1,INSD:BP617133.1,
INSD:BP572081.1,INSD:BP782647.1,INSD:EL107911.1,
INSD:EL261999.1,INSD:BP602626.1,INSD:BP606596.1,
INSD:BP811968.2"
/inference="similar to RNA sequence,
mRNA:INSD:BX815372.1,INSD:AY096568.1,INSD:AY074285.1,
INSD:AK221191.1,INSD:AK226831.1"
/note="3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN:
fatty acid elongase activity, acyltransferase activity;
INVOLVED IN: in 7 processes; LOCATED IN: cytosolic
ribosome, endoplasmic reticulum, membrane; EXPRESSED IN:
29 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Thiolase-like
(InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA
synthase (InterPro:IPR012392),
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C-terminal (InterPro:IPR013747), FAE1/Type III polyketide
synthase-like protein (InterPro:IPR013601), Thiolase-like,
subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana
protein match is: 3-ketoacyl-CoA synthase 11
(TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins
in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0;
Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes -
160 (source: NCBI BLink)."
/db_xref="Araport:AT1G01120"
/db_xref="TAIR:AT1G01120"
BEGIN
1 MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL
61 FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR LTCLVFLSFV LTLYVANRSK
121 PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI
181 TSTPPKLNMS EARAEAEAVM FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN
241 HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301 LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV
361 SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK RKMFKLKVKP YIPDFKLAFE
421 HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG
481 DRLWQIAFGS GFKCNSAVWK ALRPVSTEEM TGNAWAGSID QYPVKVVQ
//