LOCUS       AEE27224.1               645 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION   CP002684-18
PROTEIN_ID  AEE27224.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 30427671)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 30427671)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     protein         /gene="LHY"
                     /locus_tag="AT1G01060"
                     /gene_synonym="LATE ELONGATED HYPOCOTYL"
                     /gene_synonym="LATE ELONGATED HYPOCOTYL 1"
                     /gene_synonym="LHY1"
                     /gene_synonym="T25K16.6"
                     /gene_synonym="T25K16_6"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR262753.1,INSD:EG520850.1,INSD:AV442073.1,
                     INSD:EL285160.1,INSD:EH811528.1,INSD:AV821864.1,
                     INSD:AV793100.1,INSD:EL221576.1,INSD:AV807028.1,
                     INSD:AA713203.1,INSD:AV809310.1,INSD:AA650979.1,
                     INSD:AV786398.1,INSD:EG465569.1,INSD:AV793959.1,
                     INSD:EL071273.1,INSD:BP787483.1,INSD:AV805408.1,
                     INSD:AV439916.1,INSD:DR750570.1,INSD:CF773267.1,
                     INSD:R30439.1,INSD:AV525957.1,INSD:DR750341.1,
                     INSD:EG517069.1,INSD:EH853476.1,INSD:EH957137.1,
                     INSD:BP793781.1,INSD:AV518592.1,INSD:DR262755.1,
                     INSD:BP611805.1,INSD:DN604658.1,INSD:EL210103.1,
                     INSD:BP783401.1,INSD:AV519727.1,INSD:EH965397.1,
                     INSD:BX836221.1,INSD:AV794517.1,INSD:EH897895.1,
                     INSD:BP785164.1,INSD:ES162100.1,INSD:AV519209.1,
                     INSD:DR750333.1,INSD:EL125752.1,INSD:EG520849.1,
                     INSD:EG517068.1,INSD:EL187904.1,INSD:EL098580.1,
                     INSD:EH906782.1,INSD:EL269840.1,INSD:EL310869.1,
                     INSD:AV816640.1,INSD:EH922478.1,INSD:BX835664.1,
                     INSD:EL011803.1,INSD:EH968369.1,INSD:EL201800.1,
                     INSD:EL206414.1,INSD:AV792580.1,INSD:DR750340.1,
                     INSD:BP604428.1,INSD:AV519732.1"
                     /inference="similar to RNA sequence, mRNA:INSD:AY519507.1"
                     /note="LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro
                     DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
                     Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding
                     (InterPro:IPR014778), HTH transcriptional regulator,
                     Myb-type, DNA-binding (InterPro:IPR017930), Myb-like
                     DNA-binding domain, SHAQKYF class (InterPro:IPR006447);
                     BEST Arabidopsis thaliana protein match is: circadian
                     clock associated 1 (TAIR:AT2G46830.1); Has 2469 Blast hits
                     to 2022 proteins in 280 species: Archae - 2; Bacteria -
                     257; Metazoa - 292; Fungi - 162; Plants - 1048; Viruses -
                     29; Other Eukaryotes - 679 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G01060"
                     /db_xref="TAIR:AT1G01060"
     intron_pos      14:0 (1/6)
     intron_pos      51:1 (2/6)
     intron_pos      72:0 (3/6)
     intron_pos      150:0 (4/6)
     intron_pos      177:0 (5/6)
     intron_pos      535:0 (6/6)
BEGIN
        1 MDTNTSGEEL LAKARKPYTI TKQRERWTED EHERFLEALR LYGRAWQRIE EHIGTKTAVQ
       61 IRSHAQKFFT KLEKEAEVKG IPVCQALDIE IPPPRPKRKP NTPYPRKPGN NGTSSSQVSS
      121 AKDAKLVSSA SSSQLNQAFL DLEKMPFSEK TSTGKENQDE NCSGVSTVNK YPLPTKQVSG
      181 DIETSKTSTV DNAVQDVPKK NKDKDGNDGT TVHSMQNYPW HFHADIVNGN IAKCPQNHPS
      241 GMVSQDFMFH PMREETHGHA NLQATTASAT TTASHQAFPA CHSQDDYRSF LQISSTFSNL
      301 IMSTLLQNPA AHAAATFAAS VWPYASVGNS GDSSTPMSSS PPSITAIAAA TVAAATAWWA
      361 SHGLLPVCAP APITCVPFST VAVPTPAMTE MDTVENTQPF EKQNTALQDQ NLASKSPASS
      421 SDDSDETGVT KLNADSKTND DKIEEVVVTA AVHDSNTAQK KNLVDRSSCG SNTPSGSDAE
      481 TDALDKMEKD KEDVKETDEN QPDVIELNNR KIKMRDNNSN NNATTDSWKE VSEEGRIAFQ
      541 ALFARERLPQ SFSPPQVAEN VNRKQSDTSM PLAPNFKSQD SCAADQEGVV MIGVGTCKSL
      601 KTRQTGFKPY KRCSMEVKES QVGNINNQSD EKVCKRLRLE GEAST
//