LOCUS       AEE27220.1              1909 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana dicer-like 1 protein.
ACCESSION   CP002684-11
PROTEIN_ID  AEE27220.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 30427671)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 30427671)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     protein         /gene="DCL1"
                     /locus_tag="AT1G01040"
                     /gene_synonym="ABNORMAL SUSPENSOR 1"
                     /gene_synonym="ASU1"
                     /gene_synonym="ATDCL1"
                     /gene_synonym="CAF"
                     /gene_synonym="CARPEL FACTORY"
                     /gene_synonym="dicer-like 1"
                     /gene_synonym="DICER-LIKE 1"
                     /gene_synonym="EMB60"
                     /gene_synonym="EMB76"
                     /gene_synonym="EMBRYO DEFECTIVE 60"
                     /gene_synonym="EMBRYO DEFECTIVE 76"
                     /gene_synonym="SHORT INTEGUMENTS 1"
                     /gene_synonym="SIN1"
                     /gene_synonym="SUS1"
                     /gene_synonym="SUSPENSOR 1"
                     /gene_synonym="T25K16.4"
                     /gene_synonym="T25K16_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH948322.1,INSD:EH830906.1,INSD:EG522515.1,
                     INSD:BP571785.1,INSD:AI100063.1,INSD:EL120669.1,
                     INSD:EH988836.1,INSD:DR373797.1,INSD:BP629851.1,
                     INSD:AI996152.1,INSD:EH866522.1,INSD:EL096532.1,
                     INSD:EL281260.1,INSD:AV806514.1,INSD:AV815743.1,
                     INSD:ES104193.1,INSD:AV783898.1,INSD:DR380507.1,
                     INSD:BP575972.1,INSD:ES185316.1,INSD:H36434.1,
                     INSD:ES210801.1,INSD:BP563653.1,INSD:EH902174.1,
                     INSD:Z29202.1,INSD:BP789125.1,INSD:BP655894.1,
                     INSD:EL137132.1,INSD:BP568979.1,INSD:BP783219.1,
                     INSD:ES098400.1,INSD:BP787533.1,INSD:EH971167.1,
                     INSD:AV787299.1,INSD:AV781745.1,INSD:EH901232.1,
                     INSD:AV535286.1,INSD:BU636534.1,INSD:ES159107.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AF187317.1,INSD:AF292940.1"
                     /note="dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s:
                     Restriction endonuclease, type I, R subunit/Type III, Res
                     subunit (InterPro:IPR006935), Double-stranded RNA-binding
                     (InterPro:IPR001159), Argonaute/Dicer protein, PAZ
                     (InterPro:IPR003100), Ribonuclease III
                     (InterPro:IPR000999), Double-stranded RNA-binding-like
                     (InterPro:IPR014720), DEAD-like helicase, N-terminal
                     (InterPro:IPR014001), DNA/RNA helicase, C-terminal
                     (InterPro:IPR001650), Helicase, superfamily 1/2,
                     ATP-binding domain (InterPro:IPR014021), Dicer
                     double-stranded RNA-binding fold (InterPro:IPR005034);
                     BEST Arabidopsis thaliana protein match is: dicer-like 3
                     (TAIR:AT3G43920.2); Has 21958 Blast hits to 17420 proteins
                     in 2982 species: Archae - 328; Bacteria - 11461; Metazoa -
                     3615; Fungi - 1668; Plants - 1373; Viruses - 45; Other
                     Eukaryotes - 3468 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G01040"
                     /db_xref="TAIR:AT1G01040"
     intron_pos      312:0 (1/19)
     intron_pos      350:0 (2/19)
     intron_pos      420:1 (3/19)
     intron_pos      552:0 (4/19)
     intron_pos      625:1 (5/19)
     intron_pos      683:0 (6/19)
     intron_pos      724:0 (7/19)
     intron_pos      777:2 (8/19)
     intron_pos      855:2 (9/19)
     intron_pos      906:0 (10/19)
     intron_pos      967:0 (11/19)
     intron_pos      1021:0 (12/19)
     intron_pos      1053:0 (13/19)
     intron_pos      1262:2 (14/19)
     intron_pos      1295:1 (15/19)
     intron_pos      1359:0 (16/19)
     intron_pos      1661:0 (17/19)
     intron_pos      1716:0 (18/19)
     intron_pos      1851:2 (19/19)
BEGIN
        1 MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI
       61 DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV KENGLQKNGG KRDEFSKEEG
      121 DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR
      181 DGRDREVRGY WERDKVGSNE LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER
      241 KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
      301 FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN
      361 ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT PKDKRPAIFG MTASPVNLKG
      421 VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ
      481 MIAAVEEAAQ ASSRKSKWQF MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT
      541 LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
      601 AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ
      661 HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG HNNSQEMKSS QMQDTISKFR
      721 DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV
      781 SHAAFLRNAR NSEETLRKEA IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA
      841 VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
      901 RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG
      961 VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD PFLSEVSEFA ILFGNELDAE
     1021 VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD
     1081 PAKAYLFVPV TDNTSMEPIK GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR
     1141 REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
     1201 MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK
     1261 QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV LDKTYYVFLP PELCVVHPLS
     1321 GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL
     1381 GDAYLKWVVS RFLFLKYPQK HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR
     1441 WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
     1501 TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV
     1561 GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG DAVLDHLITR HLFFTYTSLP
     1621 PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF
     1681 GLGDCKAPKV LGDIVESIAG AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE
     1741 RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
     1801 ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH
     1861 AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL LELLNKTFS
//