LOCUS       AED90382.1               665 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana RNI-like superfamily protein protein.
ACCESSION   CP002688-132
PROTEIN_ID  AED90382.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 26975502)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 26975502)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 26975502)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     protein         /locus_tag="AT5G01720"
                     /gene_synonym="F7A7.240"
                     /gene_synonym="F7A7_240"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH971110.1,INSD:BP838681.1,INSD:ES157889.1,
                     INSD:AV831599.1,INSD:AV530096.1,INSD:ES197841.1,
                     INSD:EH852755.1,INSD:AV524232.1,INSD:ES141206.1,
                     INSD:DR349128.1,INSD:BP816558.1,INSD:BE525539.1,
                     INSD:AA651109.1,INSD:BP828560.1,INSD:EH993152.1,
                     INSD:CB252999.1,INSD:EL004558.1,INSD:AV816937.1,
                     INSD:BP840029.1,INSD:BP819491.1,INSD:AU230138.1,
                     INSD:BP827837.1,INSD:BP840154.1,INSD:AV534404.1,
                     INSD:AU238890.1,INSD:DR288402.1,INSD:AV534461.1,
                     INSD:ES193526.1,INSD:EL156940.1,INSD:DR381930.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX832007.1,INSD:AY086589.1,INSD:AY091103.1,
                     INSD:AK229588.1,INSD:AY122938.1"
                     /note="RNI-like superfamily protein; FUNCTIONS IN:
                     ubiquitin-protein ligase activity; INVOLVED IN:
                     ubiquitin-dependent protein catabolic process; LOCATED IN:
                     endomembrane system; EXPRESSED IN: 17 plant structures;
                     EXPRESSED DURING: 8 growth stages; CONTAINS InterPro
                     DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype
                     (InterPro:IPR006553); BEST Arabidopsis thaliana protein
                     match is: F-box family protein (TAIR:AT5G27920.1); Has
                     15959 Blast hits to 6468 proteins in 357 species: Archae -
                     0; Bacteria - 920; Metazoa - 6194; Fungi - 1434; Plants -
                     4975; Viruses - 16; Other Eukaryotes - 2420 (source: NCBI
                     BLink)."
                     /db_xref="TAIR:AT5G01720"
                     /db_xref="Araport:AT5G01720"
     intron_pos      214:0 (1/7)
     intron_pos      256:0 (2/7)
     intron_pos      291:0 (3/7)
     intron_pos      423:1 (4/7)
     intron_pos      466:2 (5/7)
     intron_pos      565:0 (6/7)
     intron_pos      649:0 (7/7)
BEGIN
        1 MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR
       61 SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT LRSLDLSRSG SFSAAGLLRL
      121 ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT
      181 VSLKWCVGVG DLGVGLLAVK CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD
      241 DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
      301 KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL
      361 DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW LIGQKCRLLE ELDLTDNEID
      421 DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ
      481 GCIHLETINI SYCQDITDKS LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD
      541 LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
      601 GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL
      661 EEMAP
//