LOCUS AED90356.1 242 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002688-97
PROTEIN_ID AED90356.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 26975502)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 26975502)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 26975502)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
protein /gene="AIRP2"
/locus_tag="AT5G01520"
/gene_synonym="ABA Insensitive RING Protein 2"
/gene_synonym="AtAIRP2"
/gene_synonym="F7A7.40"
/gene_synonym="F7A7_40"
/inference="Similar to RNA sequence,
EST:INSD:ES200245.1,INSD:CB257492.1,INSD:AV557717.1,
INSD:ES024579.1,INSD:T22636.1,INSD:BP671900.1,
INSD:BP843186.1,INSD:AV826358.1,INSD:BU635339.1,
INSD:ES071674.1,INSD:AV794566.1,INSD:AA712150.1,
INSD:ES152097.1,INSD:AV564168.1,INSD:ES113693.1,
INSD:BP856644.1,INSD:BP663168.1,INSD:AV827590.1,
INSD:CK118139.1,INSD:ES004530.1,INSD:ES019253.1,
INSD:BP661628.1,INSD:EH934658.1,INSD:BP660462.1,
INSD:EL295849.1,INSD:N96366.1,INSD:T43550.1,
INSD:BP804842.1,INSD:ES089210.1,INSD:ES086864.1"
/inference="similar to RNA sequence,
mRNA:INSD:DQ059129.1,INSD:AY050835.1,INSD:AY091165.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, RING-type, conserved site (InterPro:IPR017907),
Zinc finger, RING-type (InterPro:IPR001841), Zinc finger,
C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis
thaliana protein match is: RING/U-box superfamily protein
(TAIR:AT3G47160.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink)."
/db_xref="TAIR:AT5G01520"
/db_xref="Araport:AT5G01520"
intron_pos 22:2 (1/4)
intron_pos 73:0 (2/4)
intron_pos 95:1 (3/4)
intron_pos 173:2 (4/4)
BEGIN
1 MRKSFKDSLK ALEADIQFAN TLASEYPEEY DGGYVQMRLS YSPAAHLFLF LLQWTDCHFA
61 GALGLLRILI YKAYVDGKTT MSLHERKTSI REFYDVLFPS LLQLHGGITD VEERKQKEIC
121 DKRYRKKDRT DKGKMSEIDL EREEECGICL EIRNKVVLPT CNHSMCINCY RNWRARSQSC
181 PFCRGSLKRV NSGDLWIYTC SAEIADLPAI YKENLKRLLI YIDKLPLVTS DPNLVPYAPL
241 PR
//