LOCUS       AED90346.1               444 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION   CP002688-83
PROTEIN_ID  AED90346.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 26975502)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 26975502)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 26975502)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     protein         /gene="APD2"
                     /locus_tag="AT5G01450"
                     /gene_synonym="ABERRANT POLLEN DEVELOPMENT 2"
                     /gene_synonym="T10O8.160"
                     /gene_synonym="T10O8_160"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BE529281.1,INSD:ES116463.1,INSD:CF773968.1,
                     INSD:AV518482.1,INSD:EG512545.1,INSD:AA651416.1,
                     INSD:EL237213.1,INSD:AV439912.1,INSD:ES149332.1,
                     INSD:AU237497.1,INSD:EH867362.1,INSD:ES122109.1,
                     INSD:EL068859.1,INSD:AV525674.1,INSD:CF773035.1,
                     INSD:ES137837.1,INSD:AU228571.1,INSD:BU635166.1,
                     INSD:DR353056.1,INSD:AV534498.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT015052.1,INSD:BT015858.1,INSD:AK229004.1,
                     INSD:BX831291.1"
                     /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
                     ion binding; INVOLVED IN: biological_process unknown;
                     LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
                     plant structures; EXPRESSED DURING: 11 growth stages;
                     CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type
                     (InterPro:IPR001841); BEST Arabidopsis thaliana protein
                     match is: RING/U-box superfamily protein
                     (TAIR:AT2G38185.2); Has 1494 Blast hits to 1490 proteins
                     in 181 species: Archae - 0; Bacteria - 0; Metazoa - 838;
                     Fungi - 48; Plants - 298; Viruses - 88; Other Eukaryotes -
                     222 (source: NCBI BLink)."
                     /db_xref="TAIR:AT5G01450"
                     /db_xref="Araport:AT5G01450"
     intron_pos      84:1 (1/9)
     intron_pos      120:0 (2/9)
     intron_pos      162:0 (3/9)
     intron_pos      193:1 (4/9)
     intron_pos      218:1 (5/9)
     intron_pos      246:0 (6/9)
     intron_pos      295:0 (7/9)
     intron_pos      319:1 (8/9)
     intron_pos      420:2 (9/9)
BEGIN
        1 MSLPDSLPSS SSSPPVTREE TGFHRFEHHG NDSGFDHRDR PPWNRSEYDY RHGSVVASEN
       61 VRNNSTSEDP WSCVVVVATF CIFVSMTLIL GLYGTTNVWL GPNSSFLIKP TSVFVQNVIV
      121 EELGNKGSGL ILYGLNQAPQ LDVLTKWSEV HYLAVPNDSY KYWIQYLNKG SRVKVSYNVE
      181 SVGSSLYLVI AQGVDGLSEW VQDPTRPDTT LSWHIISDSG YIEQDITKSS SYYVAVGNVY
      241 LNEVKATIDI QVEGVLYDTT NAYYNCSFPN DKCTLSVPLF GTNAAVLTSP GPKLNNSKNE
      301 FCAKLSYEPR WIAYIVCMGV VTALLLIVSS LFNKRQPVTE DETVDENDDV APLIPGKDDD
      361 NSSWCSSYSS ILTSTEELEG AHGEGHSSTR YLCAICYDAP RDCFFLSCGH CVACFQCGTR
      421 IAETSGFCPV CRKKIRKVKK IFNV
//