LOCUS AED90340.1 309 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Aldolase-type TIM barrel family protein
protein.
ACCESSION CP002688-77
PROTEIN_ID AED90340.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 26975502)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 26975502)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 26975502)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
protein /gene="RSR4"
/locus_tag="AT5G01410"
/gene_synonym="ARABIDOPSIS THALIANA PYRIDOXINE
BIOSYNTHESIS 1.3"
/gene_synonym="ATPDX1"
/gene_synonym="ATPDX1.3"
/gene_synonym="PDX1"
/gene_synonym="PDX1.3"
/gene_synonym="PYRIDOXINE BIOSYNTHESIS 1.3"
/gene_synonym="REDUCED SUGAR RESPONSE 4"
/gene_synonym="T10O8.120"
/gene_synonym="T10O8_120"
/inference="Similar to RNA sequence,
EST:INSD:DR352127.1,INSD:EH871921.1,INSD:DR352160.1,
INSD:BP655325.1,INSD:DR352152.1,INSD:DR352111.1,
INSD:DR352099.1,INSD:DR352078.1,INSD:DR352126.1,
INSD:EH893878.1,INSD:EH849943.1,INSD:DR352129.1,
INSD:BP639550.1,INSD:EH922006.1,INSD:DR352121.1,
INSD:DR352130.1,INSD:BP832517.1,INSD:DR352080.1,
INSD:AV806200.1,INSD:ES100717.1,INSD:DR352159.1,
INSD:BP861855.1,INSD:EH901794.1,INSD:EL014450.1,
INSD:AV441604.1,INSD:DR352100.1,INSD:DR352083.1,
INSD:BP611672.1,INSD:EH836524.1,INSD:BP605035.1,
INSD:BP563180.1,INSD:DR352097.1,INSD:AV819953.1,
INSD:AV799969.1,INSD:AV831641.1,INSD:DR352125.1,
INSD:DR352164.1,INSD:DR352089.1,INSD:DR352144.1,
INSD:DR352110.1,INSD:DR352098.1,INSD:DR352137.1,
INSD:DR352076.1,INSD:AV534608.1,INSD:AV518959.1,
INSD:EH971941.1,INSD:DR352163.1,INSD:BP582044.1,
INSD:DR352123.1,INSD:DR352109.1,INSD:DR352128.1,
INSD:BP777823.1,INSD:DR352145.1,INSD:DR352143.1,
INSD:BP611368.1,INSD:AV549741.1,INSD:DR246985.1,
INSD:DR352094.1,INSD:AV537351.1,INSD:EL149964.1,
INSD:EH878980.1,INSD:DR352139.1,INSD:DR352102.1,
INSD:DR352077.1,INSD:DR352136.1,INSD:AV551235.1,
INSD:DR246981.1,INSD:BP593083.1,INSD:AV519278.1,
INSD:DR352124.1,INSD:BP824791.1,INSD:DR352084.1,
INSD:AV537724.1,INSD:BP623357.1,INSD:AV518173.1,
INSD:DR352131.1,INSD:EL330598.1,INSD:DR352134.1,
INSD:BP596625.1,INSD:BP838585.1,INSD:DR352118.1,
INSD:EH876328.1,INSD:DR352147.1,INSD:EH873327.1,
INSD:BP814405.1,INSD:DR246980.1,INSD:EL269098.1,
INSD:F15457.1,INSD:AV800124.1,INSD:BP565258.1,
INSD:CF652052.1,INSD:DR352086.1,INSD:BP650338.1,
INSD:CK117561.1,INSD:BP657959.1,INSD:AV439561.2,
INSD:DR352074.1,INSD:EL149568.1,INSD:DR352085.1,
INSD:DR352171.1,INSD:BP570729.1,INSD:EL166336.1,
INSD:BP649440.1,INSD:BP595613.1,INSD:DR352156.1,
INSD:DR352106.1,INSD:EL228642.1,INSD:DR352119.1,
INSD:EH916734.1,INSD:BP585718.1,INSD:EL288508.1,
INSD:ES097500.1,INSD:DR352170.1,INSD:AV549151.1,
INSD:EG453633.1,INSD:EG453635.1,INSD:BP642883.1,
INSD:EL986677.1,INSD:DR352117.1,INSD:DR352172.1,
INSD:EL280199.1,INSD:BP588289.1,INSD:EH961795.1,
INSD:AV519115.1,INSD:DR352155.1,INSD:AV800331.1,
INSD:CK120606.1,INSD:EL131840.1,INSD:DR352161.1,
INSD:DR352148.1,INSD:EH991607.1,INSD:DR246984.1,
INSD:AV813143.1,INSD:DR352113.1,INSD:DR246979.1,
INSD:BP839043.1,INSD:DR352114.1,INSD:EL039470.1,
INSD:BP633123.1,INSD:EL303183.1,INSD:DR352116.1,
INSD:BG459232.1,INSD:BP634389.1,INSD:BP798881.1,
INSD:DR352135.1,INSD:BP644212.1,INSD:EL286442.1,
INSD:EG453594.1,INSD:DR352112.1,INSD:AV525804.1,
INSD:DR352138.1,INSD:ES037658.1,INSD:EL317491.1,
INSD:F15381.1,INSD:DR352154.1,INSD:EH888298.1,
INSD:AV830477.1,INSD:DR352088.1,INSD:AV817251.1,
INSD:EL292881.1,INSD:DR373301.1,INSD:BP615848.1,
INSD:BP621788.1,INSD:DR352108.1,INSD:DR352149.1,
INSD:AV809265.1,INSD:BP795107.1,INSD:N38597.1,
INSD:DR352115.1,INSD:DR352087.1,INSD:AV534914.1,
INSD:BP853022.1,INSD:DR352079.1,INSD:DR352092.1,
INSD:AV811905.1,INSD:DR352104.1,INSD:BP639863.1,
INSD:DR352103.1,INSD:BP856523.2,INSD:EH861138.1,
INSD:BP818588.1,INSD:DR352141.1,INSD:AV800376.1,
INSD:BP831166.1,INSD:AI997563.1,INSD:BP805266.1,
INSD:DR352090.1,INSD:BP632713.1,INSD:DR352151.1,
INSD:F15247.1,INSD:AV524884.1,INSD:DR352166.1,
INSD:EH881726.1,INSD:EL149694.1,INSD:DR352162.1,
INSD:DR352174.1,INSD:DR352132.1,INSD:DR352169.1,
INSD:DR352093.1,INSD:EL168412.1,INSD:DR352150.1,
INSD:ES012709.1,INSD:DR352167.1,INSD:DR352120.1,
INSD:EH951509.1,INSD:DR352140.1,INSD:DR352081.1,
INSD:BP561800.2,INSD:DR352095.1,INSD:T04208.1,
INSD:DR352091.1,INSD:EH952364.1,INSD:AV549902.1,
INSD:BP652418.1,INSD:DR352173.1,INSD:EL224229.1,
INSD:DR246982.1,INSD:DR377761.1,INSD:DR352096.1,
INSD:BP612159.1,INSD:EL029992.1,INSD:DR352158.1,
INSD:EL186957.1,INSD:BP628804.1,INSD:DR352133.1,
INSD:EL132789.1,INSD:DR352101.1,INSD:ES085090.1,
INSD:DR352168.1,INSD:BP859218.1,INSD:EL049731.1,
INSD:BP844811.1,INSD:BP624382.1,INSD:DR352122.1,
INSD:EL977870.1,INSD:BP817063.1,INSD:DR352107.1,
INSD:BP856743.1,INSD:DR352075.1,INSD:EH860820.1,
INSD:EG462001.1,INSD:EL112942.1,INSD:EL032099.1,
INSD:DR352142.1,INSD:DR352082.1,INSD:BP834782.1,
INSD:EG453598.1,INSD:BP817179.1,INSD:BP619656.1,
INSD:DR352073.1,INSD:DR352105.1,INSD:AV538882.1,
INSD:AV536100.1,INSD:BP591526.1,INSD:CK121366.1,
INSD:DR352153.1,INSD:EL042620.1,INSD:AV808254.1,
INSD:EL059373.1,INSD:BP858599.1,INSD:EL325357.1,
INSD:EG462002.1,INSD:BP833855.2,INSD:ES186221.1,
INSD:BP824957.1,INSD:EL277639.1,INSD:AV524794.1,
INSD:DR352165.1,INSD:EH918575.1,INSD:EH933626.1,
INSD:DR352157.1,INSD:BP625236.1,INSD:AV560993.1,
INSD:EL253219.1,INSD:AU036594.1,INSD:DR352146.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF446352.1,INSD:AF428298.1,INSD:AY972813.1,
INSD:BX830996.1,INSD:BX831741.1,INSD:BX833592.1,
INSD:AK227197.1,INSD:BX831631.1,INSD:AY097428.1,
INSD:AY088650.1"
/note="REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN:
protein homodimerization activity, protein
heterodimerization activity; INVOLVED IN: in 12 processes;
LOCATED IN: cytosol, endomembrane system, plasma membrane;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6
biosynthesis protein (InterPro:IPR001852),
Ribulose-phosphate binding barrel (InterPro:IPR011060);
BEST Arabidopsis thaliana protein match is: pyridoxine
biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink)."
/db_xref="TAIR:AT5G01410"
/db_xref="Araport:AT5G01410"
BEGIN
1 MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA
61 LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI GHFVEAQILE AIGIDYIDES
121 EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV
181 RSVNGDIRVL RNMDDDEVFT FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM
241 MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK
301 VERFANRSE
//