LOCUS AED90316.1 408 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana like AUXIN RESISTANT 1 protein.
ACCESSION CP002688-45
PROTEIN_ID AED90316.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 26975502)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 26975502)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 26975502)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
protein /gene="LAX1"
/locus_tag="AT5G01240"
/gene_synonym="F7J8.220"
/gene_synonym="F7J8_220"
/gene_synonym="like AUXIN RESISTANT 1"
/inference="Similar to RNA sequence,
EST:INSD:BP787325.1,INSD:AV786500.1,INSD:BP780173.1,
INSD:EH860636.1,INSD:EH878879.1,INSD:EL083575.1,
INSD:BP664740.1,INSD:BP591839.1,INSD:BP654245.1,
INSD:BP664825.1,INSD:EH972697.1,INSD:BP647266.1,
INSD:AV790258.1,INSD:EL063314.1,INSD:EL022068.1,
INSD:EL240342.1,INSD:EL283994.1,INSD:EH835424.1,
INSD:CF773448.1,INSD:EH846141.1,INSD:EL072648.1,
INSD:BP779699.1,INSD:EL163876.1,INSD:EL215878.1,
INSD:EL170376.1,INSD:BP615918.1,INSD:EH984785.1,
INSD:EL187318.1,INSD:BP644678.1,INSD:BP587397.1,
INSD:BP665586.1,INSD:EL165075.1,INSD:EH804336.1,
INSD:BP638154.1,INSD:EL155882.1,INSD:EL014164.1,
INSD:BP659331.1,INSD:EH984893.1,INSD:BP792310.1,
INSD:DR363559.1,INSD:AV781921.1,INSD:EG493607.1,
INSD:EL106371.1,INSD:EH938681.1,INSD:EL150053.1,
INSD:EL134083.1,INSD:EL078195.1,INSD:EH922564.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX830786.1,INSD:BX830611.1"
/note="like AUXIN RESISTANT 1 (LAX1); FUNCTIONS IN:
transporter activity; INVOLVED IN: amino acid transport,
root cap development; LOCATED IN: endomembrane system,
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Amino acid transporter, transmembrane
(InterPro:IPR013057); BEST Arabidopsis thaliana protein
match is: Transmembrane amino acid transporter family
protein (TAIR:AT2G38120.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT5G01240"
/db_xref="Araport:AT5G01240"
intron_pos 48:0 (1/6)
intron_pos 85:2 (2/6)
intron_pos 147:0 (3/6)
intron_pos 179:2 (4/6)
intron_pos 249:0 (5/6)
intron_pos 335:0 (6/6)
BEGIN
1 MLSGILLQIF YGLMGSWTAY LISVLYVEYR ARMEKQEAKS FKNHVIQWFE VLDGLLGPYW
61 KAAGLAFNCT FLLFGSVIQL IACASNIYYI NDRLDKRTWT YIFGACCATT VFIPSFHNYR
121 IWSFLGLGMT TYTAWYLTIA SFLHGQAEGV THSGPTKLVL YFTGATNILY TFGGHAVTVE
181 IMHAMWKPRK FKSIYLMATL YVFTLTLPSA SAVYWAFGDQ LLNHSNAFSL LPKTRFRDTA
241 VILMLIHQFI TFGFACTPLY FVWEKAIGMH HTKSLCLRAL VRLPVVVPIW FLAIIFPFFG
301 PINSAVGALL VTFTVYIIPA LAHMLTYRTA SARRNAAEKP PFFIPSWAGV YVINAFIVVW
361 VLVLGFGFGG WASMTNFIRQ IDTFGLFAKC YQCKPPPAPI AAGAHHRR
//