LOCUS AED90315.1 488 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana like AUXIN RESISTANT 1 protein.
ACCESSION CP002688-44
PROTEIN_ID AED90315.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 26975502)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 26975502)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 26975502)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
protein /gene="LAX1"
/locus_tag="AT5G01240"
/gene_synonym="F7J8.220"
/gene_synonym="F7J8_220"
/gene_synonym="like AUXIN RESISTANT 1"
/inference="Similar to RNA sequence,
EST:INSD:BP787325.1,INSD:BP825250.1,INSD:BP844502.1,
INSD:AV786500.1,INSD:BP780173.1,INSD:EH860636.1,
INSD:EH878879.1,INSD:EL083575.1,INSD:DR283805.1,
INSD:BP664740.1,INSD:EL112096.1,INSD:AV821463.1,
INSD:EL239235.1,INSD:BP855385.1,INSD:BP591839.1,
INSD:BP654245.1,INSD:BP664825.1,INSD:EH972697.1,
INSD:EL155919.1,INSD:BP819900.1,INSD:BP804266.1,
INSD:BP647266.1,INSD:AV790258.1,INSD:EL063314.1,
INSD:EL022068.1,INSD:EL240342.1,INSD:EL283994.1,
INSD:BP843961.1,INSD:EH835424.1,INSD:CF773448.1,
INSD:EH846141.1,INSD:EL072648.1,INSD:BP779699.1,
INSD:BP862111.1,INSD:EL163876.1,INSD:EL215878.1,
INSD:EL170376.1,INSD:EH819666.1,INSD:BP615918.1,
INSD:EH984785.1,INSD:BP856806.1,INSD:DR283806.1,
INSD:EL187318.1,INSD:BP644678.1,INSD:AV526808.1,
INSD:BP665586.1,INSD:BP587397.1,INSD:DR376289.1,
INSD:BP868011.1,INSD:EL261982.1,INSD:EL165075.1,
INSD:EH804336.1,INSD:BP638154.1,INSD:BP659331.1,
INSD:EL014164.1,INSD:EL155882.1,INSD:BP816398.1,
INSD:BP792310.1,INSD:EH984893.1,INSD:EL253395.1,
INSD:DR363559.1,INSD:AV781921.1,INSD:EG493607.1,
INSD:BP862271.1,INSD:EL106371.1,INSD:EH938681.1,
INSD:EL150053.1,INSD:BP857703.1,INSD:EL134083.1,
INSD:EL078195.1,INSD:EH922564.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX830652.1,INSD:BX831209.1,INSD:AJ249442.1,
INSD:BX830611.1"
/note="like AUXIN RESISTANT 1 (LAX1); CONTAINS InterPro
DOMAIN/s: Amino acid transporter, transmembrane
(InterPro:IPR013057); BEST Arabidopsis thaliana protein
match is: Transmembrane amino acid transporter family
protein (TAIR:AT2G38120.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink)."
/db_xref="TAIR:AT5G01240"
/db_xref="Araport:AT5G01240"
intron_pos 65:0 (1/7)
intron_pos 128:0 (2/7)
intron_pos 165:2 (3/7)
intron_pos 227:0 (4/7)
intron_pos 259:2 (5/7)
intron_pos 329:0 (6/7)
intron_pos 415:0 (7/7)
BEGIN
1 MSGEKQAEES IVVSGEDEVA GRKVEDSAAE EDIDGNGGNG FSMKSFLWHG GSAWDAWFSC
61 ASNQVAQVLL TLPYSFSQLG MLSGILLQIF YGLMGSWTAY LISVLYVEYR ARMEKQEAKS
121 FKNHVIQWFE VLDGLLGPYW KAAGLAFNCT FLLFGSVIQL IACASNIYYI NDRLDKRTWT
181 YIFGACCATT VFIPSFHNYR IWSFLGLGMT TYTAWYLTIA SFLHGQAEGV THSGPTKLVL
241 YFTGATNILY TFGGHAVTVE IMHAMWKPRK FKSIYLMATL YVFTLTLPSA SAVYWAFGDQ
301 LLNHSNAFSL LPKTRFRDTA VILMLIHQFI TFGFACTPLY FVWEKAIGMH HTKSLCLRAL
361 VRLPVVVPIW FLAIIFPFFG PINSAVGALL VTFTVYIIPA LAHMLTYRTA SARRNAAEKP
421 PFFIPSWAGV YVINAFIVVW VLVLGFGFGG WASMTNFIRQ IDTFGLFAKC YQCKPPPAPI
481 AAGAHHRR
//