LOCUS AEC05451.1 973 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana DEAD/DEAH box RNA helicase family protein protein. ACCESSION CP002685-91 PROTEIN_ID AEC05451.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /locus_tag="AT2G01440" /gene_synonym="F2I9.6" /gene_synonym="F2I9_6" /inference="Similar to RNA sequence, EST:INSD:AV547326.1,INSD:EH883228.1,INSD:DR357248.1, INSD:ES189725.1,INSD:EG467201.1,INSD:EL092459.1, INSD:EH920858.1,INSD:DR357247.1,INSD:EH928275.1, INSD:ES157722.1,INSD:EG478873.1,INSD:EH796379.1, INSD:EG467202.1,INSD:ES153997.1,INSD:ES121121.1" /note="DEAD/DEAH box RNA helicase family protein; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="Araport:AT2G01440" /db_xref="TAIR:AT2G01440" intron_pos 12:0 (1/16) intron_pos 35:2 (2/16) intron_pos 81:0 (3/16) intron_pos 243:0 (4/16) intron_pos 280:2 (5/16) intron_pos 359:0 (6/16) intron_pos 413:2 (7/16) intron_pos 441:0 (8/16) intron_pos 471:0 (9/16) intron_pos 549:0 (10/16) intron_pos 573:0 (11/16) intron_pos 624:0 (12/16) intron_pos 672:0 (13/16) intron_pos 725:0 (14/16) intron_pos 753:0 (15/16) intron_pos 944:0 (16/16) BEGIN 1 MAAVTLSPCS MCCGSRRLRS VIVIQAQRGN WNRIRLSNFF FSKVWNISYR SKHKYSDNLL 61 EQVEKYASAR LENQSKLITK VAALMECDNV DDFIDKKSDE QVKKDLVLAC KRFPSIILGD 121 SRPVELYSNS KSYGESSSIL KTPTDNSFLP TPMHGGWFDP DNLSRTLSSF CPELLQNDDS 181 SDPREDILDD GSSFTSKTAT SEVEATSDDV FAAQRFLATS IDSMPGLSKR HSNQLDSCGF 241 HTMKKLLHHF PRTYADLQNA QVDIEDGQYL IFVGKVLSSK GVRASSSFSF LEVIVSCEVS 301 GRDRTPEDLS HNAEDKAGKS IFLHLKKFFR GTRFTWQPFL NSIQEKHKVG DLVCISGKVK 361 SLRAEDHFEM REYNIDVLKD EEESSHRAQG RPYPIYPSKG GLNPKFLSDV ISRALRVLPA 421 NMDPIPKEIT KVFGLPSLND AYVGIHEPKT LDEADLARKR LIFDEFFYLQ LARLYQMLQS 481 LGTKIEKDVL LEKFRKPVLN SVYIEEWSTL TKSFLKALPY SLTPSQLSAV SEIIWDLKRP 541 VPMNRLLQGD VGCGKTVVAF LACMEVIGSG YQAAFMAPTE LLAIQHYEQC RDLLENMEGV 601 SSKPTIGLLT GSTPAKQSRM IRQDLQSGAI SFIIGTHSLI AEKIEYSALR IAVVDEQQRF 661 GVIQRGKFNS KLYGTSMISK SGSSDSDDTS KADLSMAPHV LAMSATPIPR SLALALYGDI 721 SLTQITGMPL GRIPVETHIF EGNETGIKEV YSMMLEDLKS GGRVYVVYPV IDQSEQLPQL 781 RAASAELEIV TKKFPKYNCG LLHGRMKSDD KEEALNKFRS GETQILLSTQ VIEIGVDVPD 841 ASMMVVMNAE RFGIAQLHQL RGRVGRGTRK SKCLLVGSST NSLKRLNMLG KSSDGFYLAN 901 IDLLLRGPGD LLGKKQSGHL PEFPVARLEI DGNMLQEAHI AALNVLGDSH DLEKFPALKA 961 ELSMRQPLCL LGD //