LOCUS       AEC05451.1               973 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana DEAD/DEAH box RNA helicase family
            protein protein.
ACCESSION   CP002685-91
PROTEIN_ID  AEC05451.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G01440"
                     /gene_synonym="F2I9.6"
                     /gene_synonym="F2I9_6"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV547326.1,INSD:EH883228.1,INSD:DR357248.1,
                     INSD:ES189725.1,INSD:EG467201.1,INSD:EL092459.1,
                     INSD:EH920858.1,INSD:DR357247.1,INSD:EH928275.1,
                     INSD:ES157722.1,INSD:EG478873.1,INSD:EH796379.1,
                     INSD:EG467202.1,INSD:ES153997.1,INSD:ES121121.1"
                     /note="DEAD/DEAH box RNA helicase family protein;
                     FUNCTIONS IN: ATP-dependent DNA helicase activity,
                     helicase activity, nucleic acid binding, ATP-dependent
                     helicase activity, ATP binding; INVOLVED IN: DNA repair,
                     DNA recombination; EXPRESSED IN: 12 plant structures;
                     EXPRESSED DURING: 6 growth stages; CONTAINS InterPro
                     DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal
                     (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like
                     (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG
                     (InterPro:IPR004609), DEAD-like helicase, N-terminal
                     (InterPro:IPR014001), DNA/RNA helicase, C-terminal
                     (InterPro:IPR001650), Helicase, superfamily 1/2,
                     ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
                     thaliana protein match is: DEAD/DEAH box helicase,
                     putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322
                     proteins in 780 species: Archae - 12; Bacteria - 1396;
                     Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
                     Other Eukaryotes - 2996 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G01440"
                     /db_xref="TAIR:AT2G01440"
     intron_pos      12:0 (1/16)
     intron_pos      35:2 (2/16)
     intron_pos      81:0 (3/16)
     intron_pos      243:0 (4/16)
     intron_pos      280:2 (5/16)
     intron_pos      359:0 (6/16)
     intron_pos      413:2 (7/16)
     intron_pos      441:0 (8/16)
     intron_pos      471:0 (9/16)
     intron_pos      549:0 (10/16)
     intron_pos      573:0 (11/16)
     intron_pos      624:0 (12/16)
     intron_pos      672:0 (13/16)
     intron_pos      725:0 (14/16)
     intron_pos      753:0 (15/16)
     intron_pos      944:0 (16/16)
BEGIN
        1 MAAVTLSPCS MCCGSRRLRS VIVIQAQRGN WNRIRLSNFF FSKVWNISYR SKHKYSDNLL
       61 EQVEKYASAR LENQSKLITK VAALMECDNV DDFIDKKSDE QVKKDLVLAC KRFPSIILGD
      121 SRPVELYSNS KSYGESSSIL KTPTDNSFLP TPMHGGWFDP DNLSRTLSSF CPELLQNDDS
      181 SDPREDILDD GSSFTSKTAT SEVEATSDDV FAAQRFLATS IDSMPGLSKR HSNQLDSCGF
      241 HTMKKLLHHF PRTYADLQNA QVDIEDGQYL IFVGKVLSSK GVRASSSFSF LEVIVSCEVS
      301 GRDRTPEDLS HNAEDKAGKS IFLHLKKFFR GTRFTWQPFL NSIQEKHKVG DLVCISGKVK
      361 SLRAEDHFEM REYNIDVLKD EEESSHRAQG RPYPIYPSKG GLNPKFLSDV ISRALRVLPA
      421 NMDPIPKEIT KVFGLPSLND AYVGIHEPKT LDEADLARKR LIFDEFFYLQ LARLYQMLQS
      481 LGTKIEKDVL LEKFRKPVLN SVYIEEWSTL TKSFLKALPY SLTPSQLSAV SEIIWDLKRP
      541 VPMNRLLQGD VGCGKTVVAF LACMEVIGSG YQAAFMAPTE LLAIQHYEQC RDLLENMEGV
      601 SSKPTIGLLT GSTPAKQSRM IRQDLQSGAI SFIIGTHSLI AEKIEYSALR IAVVDEQQRF
      661 GVIQRGKFNS KLYGTSMISK SGSSDSDDTS KADLSMAPHV LAMSATPIPR SLALALYGDI
      721 SLTQITGMPL GRIPVETHIF EGNETGIKEV YSMMLEDLKS GGRVYVVYPV IDQSEQLPQL
      781 RAASAELEIV TKKFPKYNCG LLHGRMKSDD KEEALNKFRS GETQILLSTQ VIEIGVDVPD
      841 ASMMVVMNAE RFGIAQLHQL RGRVGRGTRK SKCLLVGSST NSLKRLNMLG KSSDGFYLAN
      901 IDLLLRGPGD LLGKKQSGHL PEFPVARLEI DGNMLQEAHI AALNVLGDSH DLEKFPALKA
      961 ELSMRQPLCL LGD
//