LOCUS ADR19921.1 1161 aa PRT BCT 08-JUN-2015 DEFINITION Calditerrivibrio nitroreducens DSM 19672 hypothetical protein protein. ACCESSION CP002347-2004 PROTEIN_ID ADR19921.1 SOURCE Calditerrivibrio nitroreducens DSM 19672 ORGANISM Calditerrivibrio nitroreducens DSM 19672 Bacteria; Deferribacteres; Deferribacterales; Calditerrivibrionaceae. REFERENCE 1 (bases 1 to 2157835) AUTHORS Pitluck,S., Sikorski,J., Zeytun,A., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Djao,O.D., Rohde,M., Spring,S., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Land,M. TITLE Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1) JOURNAL Stand Genomic Sci 4 (1), 54-62 (2011) PUBMED 21475587 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2157835) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Zeytun,A., Brettin,T., Detter,J.C., Tapia,R., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Schroeder,M., Brambilla,E., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of chromosome of Calditerrivibrio nitroreducens DSM 19672 JOURNAL Unpublished REFERENCE 3 (bases 1 to 2157835) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Zeytun,A., Brettin,T., Detter,J.C., Tapia,R., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Schroeder,M., Brambilla,E., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (18-NOV-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4087656 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Calditerrivibrio nitroreducens Yu37-1, DSM 19672 collection_date :: Missing lat_lon :: 36.829513 138.217163 depth :: Missing alt_elev :: Missing country :: Japan environment :: Host num_replicons :: 2 ref_biomaterial :: DSM 19672, NBRC 101217 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 18599715 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04007 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Terrestrial hot spring; Japan, Nagano, Yumata Cell Shape :: Vibrio-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 55C pH :: 7.0 - 7.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: Illumina, 454 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Calditerrivibrio nitroreducens DSM 19672" /mol_type="genomic DNA" /strain="DSM 19672" /isolation_source="terrestrial hot spring" /type_material="type strain of Calditerrivibrio nitroreducens" /db_xref="taxon:768670" /country="Japan: Nagano, Yumata" /lat_lon="36.829514 N 138.217163 E" protein /locus_tag="Calni_2027" /note="KEGG: ttm:Tthe_0499 hypothetical protein; SPTR: Putative uncharacterized protein" /transl_table=11 BEGIN 1 MIIKNIFEKD IERPINGVVK VGQDDLNIIK TEVEEYIVTS EIKKYLDDFF THYVETLGMQ 61 TDKIGIWISG FFGSGKSHLL KMLAYIIENP TIGDNLTAGE IIREKVKDDA LLSANIKKAY 121 QTPSDVILFN IDSMSDTADG GEESIPKVFR RVFYDKLGYF GRFPFIAEIE RNLDKKGCYE 181 KFKDKFKELT GFNWIDERKN FALHEKKIFE ALAYCNNVTI EEAENYYNKT EDYFKSISIS 241 DFAEMVKEYV DQKNKELKTN NYRLLFMVDE VGQFIAQDTN KMLNLQTIVE ELGVKCKGSV 301 WVVVTSQEDV ESIIGDLPKT SKNEFSKILG RFKRFSLSGS NTDEVIKKRI LAKNVEAAEE 361 LKKLYDKYSS ILKNQFTFTA DTATFEKYKD ENDFINTYPF IPYQFKLLQK VFEAIRTKGI 421 AGKHLSHGER SMLNAFQEAC KNIKDSELGY ISPFYLFYDT IEGFMDSYVL LTIKNAETNS 481 SLNSFDVNLL KLLFLIRYVG QIKSNIDNIV ILMLEKIDQD KQSLKEKIKE SLSKLEHEVL 541 INKSGDTYNF LTNEERDIRQ EIKRIPIDSD ARSNFIYEIV FNEIYLDTKH KYTHYNNNYD 601 LIRTVDNISK GNGKLEIKVV TQHYYETSDS NLAMESQQRR IVIRLNSSND LERELKAYLQ 661 TDEYIRKHQV STKESFSNII RDTQKENDER RKRIKSIIEN LLENADYFGL GNKLNLLKPV 721 NFRNVLRDQL DEIVGHIYHK MYLITQNSIK TASEIKEALN KKRSIVIDIT TNDSAENEII 781 NFIRDISHLE GNVTLKKIYD RFTEEPYGWK LLDIQYVIAI LVANEKIHLL YQNEKISSQF 841 HSKLEELITK SSYQSVVYVT LPQTANEDEI NKAKQIFQEV SDNIPEENSD DFLKQFKKYI 901 NDLVEDIKAN LGSLSSDFIP KVIAEEYLEE LVKIAKQSDK VDIIKGIINN EKNLPTWIEY 961 LGKVKNFLSN QIDRYKEIRE FINTYKDGIV HYDHKTANDL LSKCNEYIKS ESPFHLTIAL 1021 ANEIDNVSNE LKKKLESKKE ACIDEIRKRY EYALQISKEN NEKIDEKLDP LDKMIEQIKN 1081 ELKIENVIAK HSTFTQKIDK IIEIIKNKPK DKNTPKRVKI SSIIYPKIIS SKEEIDSFVN 1141 ELKEKLYKEL QNNEKIEISG D //