LOCUS ADR18522.1 1165 aa PRT BCT 08-JUN-2015 DEFINITION Calditerrivibrio nitroreducens DSM 19672 hypothetical protein protein. ACCESSION CP002347-605 PROTEIN_ID ADR18522.1 SOURCE Calditerrivibrio nitroreducens DSM 19672 ORGANISM Calditerrivibrio nitroreducens DSM 19672 Bacteria; Deferribacteres; Deferribacterales; Calditerrivibrionaceae. REFERENCE 1 (bases 1 to 2157835) AUTHORS Pitluck,S., Sikorski,J., Zeytun,A., Lapidus,A., Nolan,M., Lucas,S., Hammon,N., Deshpande,S., Cheng,J.F., Tapia,R., Han,C., Goodwin,L., Liolios,K., Pagani,I., Ivanova,N., Mavromatis,K., Pati,A., Chen,A., Palaniappan,K., Hauser,L., Chang,Y.J., Jeffries,C.D., Detter,J.C., Brambilla,E., Djao,O.D., Rohde,M., Spring,S., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Land,M. TITLE Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1) JOURNAL Stand Genomic Sci 4 (1), 54-62 (2011) PUBMED 21475587 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2157835) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Zeytun,A., Brettin,T., Detter,J.C., Tapia,R., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Schroeder,M., Brambilla,E., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of chromosome of Calditerrivibrio nitroreducens DSM 19672 JOURNAL Unpublished REFERENCE 3 (bases 1 to 2157835) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Zeytun,A., Brettin,T., Detter,J.C., Tapia,R., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Spring,S., Schroeder,M., Brambilla,E., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (18-NOV-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4087656 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Calditerrivibrio nitroreducens Yu37-1, DSM 19672 collection_date :: Missing lat_lon :: 36.829513 138.217163 depth :: Missing alt_elev :: Missing country :: Japan environment :: Host num_replicons :: 2 ref_biomaterial :: DSM 19672, NBRC 101217 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 18599715 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04007 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Terrestrial hot spring; Japan, Nagano, Yumata Cell Shape :: Vibrio-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 55C pH :: 7.0 - 7.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: Illumina, 454 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Calditerrivibrio nitroreducens DSM 19672" /mol_type="genomic DNA" /strain="DSM 19672" /isolation_source="terrestrial hot spring" /type_material="type strain of Calditerrivibrio nitroreducens" /db_xref="taxon:768670" /country="Japan: Nagano, Yumata" /lat_lon="36.829514 N 138.217163 E" protein /locus_tag="Calni_0610" /note="COGs: COG3096 conserved hypothetical protein involved in chromosome partitioning; InterPro IPR004969; KEGG: drt:Dret_1493 SMC domain protein; SPTR: SMC domain protein; PFAM: MukB N-terminal" /transl_table=11 BEGIN 1 MNYAKFKTYI DSVIIIGFKL YPNCIFKLDD TFTSIFGKNG VGKTTILDAI QVGIIANQHY 61 IKFNVTTHKD DRTLGDYMYL HTGYILFNVG GTPKKYAFGV RLLKQPDGKV EIKTMVVENT 121 HLTNNDFFNG TMLYTDLNQL HRNIINNYPY ATVNFPESIA EYHTYLYEKN IVGINISSKI 181 SEFSALYRSI STGILQQSNK ILKDILAPPD GKSRNLIETL SKSIKQRNII NQKIIEIREI 241 IKEVQNLIDV SNRYIMISYK YFCTEYNRLI GEKKLLSDEI DNAESELKKI DLELIDYTNR 301 IEAKSSELST VNSELYKIIE NISNTEKHLK AHKDYIEIKN SIKESNKKLE NFTLTLEEIL 361 KKKHELYNRI DSINPEIIEL NEQKSSLKYK IGDLKEHVKK LNELKKHISI LENTLFIKLT 421 HKNIDQEIRH WQEIGEKIRN ITLINQQINT LEEQISLHKK ALTILDDLKR YGLTIEKQDD 481 ISATLDKEER RIYELKNTID NKTLEKKRLE TKIETLLKGR IDLPDVLKNY HGRFLYREFN 541 EIPIEESIRI ESSLGELKKA VIFKDDIDSD LLRGKDRLYF ISEKALEKVV PPVLQEYQDG 601 FLMEDSDGIL RYEPKPEFPT IGEVSRKKTA EALKKEIELL EADLKNLHNE LLERKLIKEK 661 LTNLISIYEY TEKKDLIEKY EHLIRERDYL ESKIQIYNKI KASLDIIKQL ISYFGRDDYL 721 HDLEESQRSF DEITNKIKVL EKSSSELKTD YEKNTEIENQ TKEKIDLLKR DINKLEGKKE 781 QLETNFPLKV LNGEIDFNVK DSLILEKDAL IDRQNRLTKV LDSLKDEKRK LEYHQTITTN 841 KLRDNIEKLK YIEDVTLNLT TEFSLYFNNK TLEPINYNVK KEEFYKLKGV FEEKLSEFLR 901 KNKKDEPTIT YIEDKLNESI LKVYPYFQSL SKLEDQLNEL SRKLKDIETE IKLAIGNFKN 961 NIDQNILKIK GNLHSTNKDL SAIKFGRIRS INISVKEREA YYKLQKVYEN NSILSLLESD 1021 SIEYDTFVKE LAKNLGYSRT IPTDEDILDY RNYFDIFIEL KDEHNQTRTK GLSNGENLGT 1081 NILIVLAMLT RFIDGSISNK VLPILLDEAD RLDSDSIKTL YEIAEEWGLQ MIVALPNIPN 1141 FNKGIHYQLI AQDNGIVTIH TRFAK //