LOCUS ADH89766.1 948 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 outer membrane autotransporter barrel domain protein protein. ACCESSION CP002026-2429 PROTEIN_ID ADH89766.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_2471" /inference="protein motif:TFAM:TIGR01414" /note="KEGG: xau:Xaut_2277 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein" /transl_table=11 /db_xref="InterPro:IPR005546" /db_xref="InterPro:IPR006315" BEGIN 1 MAQATPLPSP PSPTTYETLD FGDHDTFLTG IRGDNIVGNY IIPGTAETGG LYYNMTTKTW 61 LPMPQATDNG ANFPGAIGSS PYGPNFGNPD GILRVVGSYQ TSTSAPYDLS YLYDGAAAPG 121 QQIKTLVYPG ADTLFTIAHS TFGNQVVGDY DTRLATGNAF IYNIDTGTFT TNNIPGAVST 181 TAYGIYGDKI AGGYGEVMVG GGIHAEHGYI YDQTTGTYET YDHPGAVATH FEGITGAGRS 241 GEYNLVANWV TADGVVHPAV MHVDALGIAT WYEIDIPGAV VSSNSAYGDN VVGIYVDATG 301 IHGFLATIPG IYNPIRNTGA LTFAGDNAAA LSGRKGDDII NSGTVQVTGN GGIGMRGETY 361 GVLTNSGTIT ATGIAGAAVE LHGLYGTFLN YGTLQTTVEA DALRTGPDSY GTVIVNMGVI 421 DGRLAATAGP GKRFENSGWL GVSGTGPSIT SLISATFVQT AAGTYAPRIT DTGPDLLEVT 481 GTMRLAGTLQ TTFLTTSFAP STTLIAATQG ITGTFDDFLT PGLPALFDAS LDYNPTNVTL 541 NVAADLAGMA GNTPNQRAVG AAIDGIINTT TNGLLTSLPG ALAPLYGLTA AELPGALDAL 601 SGAAYASEQT VLIGDSLYSR QAVLGRLRQG AYAGQSGPMA GLAYGGPALA YAAPTASNVP 661 FPTKAPPAAE PTFDGTVWAQ AFGGWSNYDG GANAADVDSD IGGIISGADA KLDNWRLGAA 721 VGYSYSSTDV DDLASSSEVN SLLLALYAGT SAGPWNLRLG ATYAFNWIDA SRSIAYRGYA 781 EQANADYDGG TAQVFAEVGY GFALRQVAFE PFAGLAYVHV DTDGFTETGA SAGLAGASSS 841 MGVGYSTLGL RVATAMELSS GMALEPHASV AWQYAFGDIT PEARMSFLSV PGANFTVAGV 901 PLAENTALVE VGADLRISEQ ARIGLSYVGQ LADEVTVNAV QANLRWRF //