LOCUS ADH89239.1 747 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 DEAD/DEAH box helicase domain protein protein. ACCESSION CP002026-1902 PROTEIN_ID ADH89239.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_1939" /inference="protein motif:PFAM:PF00270" /note="KEGG: mno:Mnod_8552 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein" /transl_table=11 /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" BEGIN 1 MLPSAFDRLA MPVRRWIWQQ KWATLRDVQE KAIPAVLAGG DIVISARTAA GKTEAAFLPL 61 LSRLVNSEQT ADGFAVLYVA PLKALINDQH RRLESLCEAC GVLLHKWHGD VDENAKARAR 121 KRPSGIVLIT PESLEALLVR RGSEVLRLFS RLDAVVIDEL HAFIGTERGM QLQSLLTRIE 181 VAVGRPRIDR IGLSATLGDM MLAAESLRPG GGSSVSIVEG TDAGNGLKLQ IRGYELHPFE 241 KPEEIADDDP ETDPATAEPF DRSEVPGALA EDLFRFLRGR SNLLFAGSRA RVEIYTDRLS 301 TMCLKQKLPN EFFAHHGNLA KAVREEVEVR LRDDPRPTTA VATMTLELGI DIGDVATVAQ 361 IGPGFSVASL RQRVGRSGRR AGRPAILRIF APEIVAGPGS HPLDRLYLEL IQSIAMVECL 421 RENWCEPPAH AGLHLSTLVH QLLALILQLG GVSPSVAWEV LCGRGPFRLV SKPLFADLLR 481 CMAHSEIQLV EQSPQGLLML GARGEQIAES YEFYAVFMSE VEYRIVHEGR TLGTYPLGTP 541 LAAGETLIFA GRRWLIIEID DDGRVILVRP TRAGKPPQFS SGGGEIHDYI VDKMRAILAG 601 NEAFVYLDAC ASRLLADARI AFGNLGLHQQ NILPCGRNTL VFPWVGSKRL TTLLLALMAR 661 ELKGTAAWHA LEIQDVRCDG VARHLQALAD EPEPDAMRLA ERLSQPQLAK FDYVLSPELM 721 KRVTIQERLD VSAVPWMARR ILELDRS //