LOCUS ADH89106.1 608 aa PRT BCT 28-JAN-2014 DEFINITION Ancylobacter novellus DSM 506 glucosamine/fructose-6-phosphate aminotransferase, isomerizing protein. ACCESSION CP002026-1769 PROTEIN_ID ADH89106.1 SOURCE Ancylobacter novellus DSM 506 ORGANISM Ancylobacter novellus DSM 506 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Xanthobacteraceae; Ancylobacter. REFERENCE 1 (bases 1 to 4765023) AUTHORS Kappler,U., Davenport,K., Beatson,S., Lucas,S., Lapidus,A., Copeland,A., Berry,K.W., Glavina Del Rio,T., Hammon,N., Dalin,E., Tice,H., Pitluck,S., Richardson,P., Bruce,D., Goodwin,L.A., Han,C., Tapia,R., Detter,J.C., Chang,Y.J., Jeffries,C.D., Land,M., Hauser,L., Kyrpides,N.C., Goker,M., Ivanova,N., Klenk,H.P. and Woyke,T. TITLE Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) JOURNAL Stand Genomic Sci 7 (1), 44-58 (2012) PUBMED 23450099 REFERENCE 2 (bases 1 to 4765023) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Bruce,D., Goodwin,L., Pitluck,S., Davenport,K., Brettin,T., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Beatson,S., Kappler,U. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4084204 Source DNA available from Ulrike Kappler (u.kappler@uq.edu.au) Organism available from DSMZ: DSM 506 Contacts: Ulrike Kappler (u.kappler@uq.edu.au) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Starkeya novella DSM 506 Culture Collection ID :: DSM 506, ATCC 8093, CCM 1077, IFO 12443, NBRC 12443, NCIB 9113 GOLD Stamp ID :: Gi02557 Greengenes ID :: 4661 Funding Program :: DOE-CSP 2008 Sequencing Depth :: 21x Isolation Site :: Soil Temperature Range :: Mesophile Temperature Optimum :: 26 - 30C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Soil Energy Source :: Chemolithotroph, Heterotroph ##Metadata-END## FEATURES Qualifiers source /organism="Ancylobacter novellus DSM 506" /mol_type="genomic DNA" /strain="DSM 506" /isolation_source="soil" /type_material="type strain of Thiobacillus novellus" /db_xref="taxon:639283" protein /locus_tag="Snov_1802" /inference="protein motif:TFAM:TIGR01135" /note="KEGG: rpb:RPB_2854 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS)" /transl_table=11 /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR001347" /db_xref="InterPro:IPR005855" /db_xref="InterPro:IPR017932" BEGIN 1 MCGIIGIVGT APVADRLVES LKRLEYRGYD SAGLATLETG RLARRRAEGK LRNLEAVLRE 61 APLKGHTGIG HTRWATHGRP SVANAHPHAT TNVAVVHNGI IENFRELRDE LLGEGANFES 121 ETDTEVVAHL VTREMRDGRN PVDAVAATLP RLQGAFALAF LIDGEENLLI GARKGSPLAI 181 GYGKGEMYLG SDAIALAPFT DTIAYLDDGD WAVLRRGGAE IHDASNALVE RVAQKTTASA 241 FLVEKGNFRH FMAKEMHEQP EVVAHTLAHY LDMASDTVQL PGNLPFDFAK LERVSIAACG 301 TAYYAGLVAK YWFERYARLP VEIDVASEFR YREAPLPANG LSIVISQSGE TADTLASLRY 361 ARDAKQHLLA VVNVPTSTIA READVIMPTL AGPEIGVAST KAFTCQLATL AAVAVAAGRA 421 RGVISAAEER SLVHALVEVP RLMNEALKLE GDIEHLARSF AKTQDVLYLG RGTSYPLALE 481 GALKLKEISY IHAEGYAAGE LKHGPIALID EKMPVVVIAP HDAVFEKTMS NMQEVAARGG 541 RIILITDATG AAKASLETEA TLVLPDMHPL VAPLVYAIPV QLLAYHTAVV MGTDVDQPRN 601 LAKSVTVE //